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IPK Gatersleben > Research > Dept. Molecular Genetics > Image Analysis
 

 

Image Analysis
Head: Dr. Christian Klukas
Tel: +49 (0)39482 5763
Fax: +49 (0)39482 5500
Email: klukas@ipk-gatersleben.de
Research Interest
The research group image analysis focuses on the development and establishment of an information system for the storage and analysis of high-throughput image data.
Recently established infrastructure for the automated movement and imaging of plants enables researchers to collect huge amounts of image data (captured are visible light, near-infrared spectra and fluorescence). Newly developed or adapted image analysis and data integration methods as well as the usage of existing software packages make it possible to investigate developmental changes and differences in the phenotype of plants.

Essential for this work are close interactions with molecular and developmental biologists, molecular physiologists, genetics, biochemists and bioinformaticians as well as computer scientists.
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Recent References
201220112010200920082007200620052004
[ ^ ] 2012
[ ^ ] 2011
2011 ROHN, H., C. KLUKAS & F. SCHREIBER
Creating Views on Integrated Multi-Domain Data.                                    
Bioinformatics, doi:10.1093/bioinformatics/btr282.
2011 ROHN, H., C. KLUKAS & F. SCHREIBER
Visual Analytics of Multimodal Biological Data, Proceedings of the International Conference on Information Visualization Theory and Applications (IVAPP’11).
SciTePress: 256-261.
2011 JUSUFI, I., C. KLUKAS, A. KERREN & F. SCHREIBER
Guiding the interactive exploration of metabolic pathway interconnections.
Information Visualization 2011.
[ ^ ] 2010
2010 SHARBEL, T.F., M.L. VOIGT, J.M. CORRAL, G. GALLA, J. KUMLEHN, C. KLUKAS, F. SCHREIBER, H. VOGEL & B. ROTTER
Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns.
The Plant Cell 22: 655-671.
2010 KLUKAS, C. & F. SCHREIBER
Integration of -omics data and networks for biomedical research.            
Journal of Integrative Bioinformatics 7(2): 112.1-6
2010 WEIDEMANN, W, C. KLUKAS, A. SIMM, F. SCHREIBER & R. HORSTKORTE
Lessons from GNE-deficient embryonic stem cells: sialic acid biosynthesis is involved in proliferation and gene expression. Glycobiology 20(1): 107-117.
2010 HIPPE, K., C. COLMSEE, T. CZAUDERNA, E. GRAFAHREND-BELAU, B. H. JUNKER, C. KLUKAS, U. SCHOLZ, F. SCHREIBER & S. WEISE
Novel developments of the MetaCrop information system for facilitating systems biological approaches.
Journal of Integrative Bioinformatics 7(3): 125.1‑9.
2010 CZAUDERNA, T., C. KLUKAS & F. SCHREIBER
Editing, validating, and translating of SBGN maps.                                     
Bioinformatics. 26(18): 2340-2341.
2010 HUANG, D., Y. HUANG, C. KLUKAS,R. HOFESTÄDT, M. CHEN
PBSK Browser: navigate biological pathways of PSI-MI, BioPAX, SBML and KGML formats.
2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW), pp. 13-17
2010 CZAUDERNA, T., C. KLUKAS & F. SCHREIBER
SBGN-ED.                                                                                                   
http://vanted.ipk-gatersleben.de/addons/sbgn-ed/

2010 KLUKAS, C.& F. SCHREIBER
VANTED.
2010 RHON, H., C. KLUKAS & F. SCHREIBER
HIVE.
[ ^ ] 2009
[ ^ ] 2008
[ ^ ] 2007
[ ^ ] 2006
[ ^ ] 2005
[ ^ ] 2004
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Staff
scientific staff         staff or visitors
Klukas, Dr. Christian +49 (0)39482 5763
Entzian, Alexander +49 (0)39482 5755
 
Mücke, Ingo +49 (0)39482 5796 or 784
Jean-Michel Pape +49 (0)39482 5796
   
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Interesting Links

Link Content
http://pgrc-16.ipk-gatersleben.de/~klukas/
Homepage of Dr. Christian Klukas
Visualization and Analysis of Networks containing Experimental Data
Bioinformatics @ IPK Gatersleben
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