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This research group focuses on modelling, analysis, simulation and visualization of biological networks in the context of plant biological problems.
Our aim is the development of software tools for the analysis of complex metabolic and regulatory networks. Therefore we attempt to integrate and process data from different areas of genome and proteome research and to present the results in a user-friendly way. The emphasis is on the linkage of experimental data about expression profiles, metabolite and protein pattern with metabolic and regulatory networks. The information and complex connections will be modelled using graphs. Graph (network) analysis and interactive visualization methods will be used to discover network properties and to make the data easily accessible to the user. A subsequent step is to use the data for the simulation of metabolic and regulatory networks. The aim is to compute predictions in addition to the experimental approaches.
In addition to the development of software tools, theoretical questions will be approached. The focus is on questions about the structure and properties of networks in order to detect conditions for the stability and plasticity of living systems and to simplify the simulation of networks.
See the Web site of the research group nwg.big-gh.de for more information.
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| 2011 |
KOCH, I., W. REISIG & F. SCHREIBER
| Modeling in Systems Biology: the Petri Net approach. Springer Book Series Computational Biology, Vol. 16, 1st Edition 2011, XXIII, 364 p., Hardcover, ISBN: 978-1-84996-473-9. |
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| 2011 |
MEHLHORN, H. & F. SCHREIBER
| The DBE2 information system.
(Intl. Wsh. on Translational Bioinformatics - HIBIT) in press. |
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| 2011 |
KRACH, C., E. GRAFAHREND-BELAU, H. POSKAR, K. SCHALLAU, F. SCHREIBER & B. H. JUNKER
| Using systems approaches to analyze metabolic networks involved in storage reserve synthesis in developing seeds, in G. K. Agrawal and R. Rakwal (eds.), Seed development: omics technologies toward improvement of seed quality and crop yield.
Springer (to appear). |
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| 2011 |
LOTZ, K., A. HARTMANN, E. GRAFAHREND-BELAU, F. SCHREIBER & B. H. JUNKER
| Elementary flux modes, flux balance analysis and their application to plant metabolism, in G. Sriram (ed.), Methods in Molecular Biology: Plant Metabolism.
Humana Press (in press). |
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| 2011 |
BACHMAIER, C., U. BRANDES & F. SCHREIBER
| Biological networks, in R. Tamassia (ed.), Handbook of Graph Drawing and Visualization.
Chapman & Hall/CRC Press (in press). |
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| 2011 |
JUSUFI, I., C. KLUKAS, A. KERREN & F. SCHREIBER
| Guiding the interactive exploration of metabolic pathway interconnections.
Information Visualization 2011. (in press) |
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| 2011 |
WEISE, S., B. H. JUNKER, M. KLAPPERSTÜCK, M. LANGE, F. SCHREIBER & U.SCHOLZ
| Das Informationssystem MetaCrop zur Unterstützung systembiologischer Forschung an Kulturpflanzen.
it Information Technology. (in press). |
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| 2011 |
MELKUS, G., H. ROLLETSCHEK, J. FUCHS, V. RADCHUK, E. GRAFAHREND-BELAU, N. SREENIVASULU, T. RUTTEN, D. WEIER, N. HEINZEL, F. SCHREIBER, T. ALTMANN, P. JAKOB & L. BORISJUK
| Dynamic 13C/1H NMR imaging uncovers sugar allocation in the living seed.
Plant Biotechnology Journal. (in press). |
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| 2011 |
ROLLETSCHEK, H., G. MELKUS, E. GRAFAHREND-BELAU, J. FUCHS, N. HEINZEL, F.SCHREIBER, P. M. JAKOB & L. BORISJUK
| Combined non-invasive imaging and modelling approaches reveal metabolic compartmentation in the cereal endosperm.
Plant Cell 2011. (in press). |
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| 2011 |
ROHN, H., C. KLUKAS & F. SCHREIBER
| Visual Analytics of Multimodal Biological Data, Proceedings of the International Conference on Information Visualization Theory and Applications (IVAPP’11).
SciTePress: 256-261. |
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| 2011 |
ROHN, H., C. KLUKAS & F. SCHREIBER
| Creating Views on Integrated Multi-Domain Data.
Bioinformatics, 27(13): 1839-1845. doi:10.1093/bioinformatics/btr282. |
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| 2011 |
HARTMANN, A., T. CZAUDERNA, R. HOFFMANN, N. STEIN & F. SCHREIBER
| HTPheno: An Image Analysis Pipeline for High-Throughput Plant Phenotyping.
BMC Bioinformatics 12: 148. |
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| 2011 |
MEHLHORN, H., F. SCHREIBER
| DBE2 - Management of experimental data for the VANTED system.
J Integr Bioinform. 8(2) e162. |
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| 2011 |
GRAFAHREND-BELAU, E., B.H. JUNKER, F. SCHREIBER
| Plant metabolic pathways: databases and pipeline for stoichiometric analysis. In: Agrawal, G.K. and R. Rakwal (Eds.): Seed development: omics technologies toward improvement of seed quality and crop yield.
Springer (to appear). |
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| 2011 |
JUNKER A., B.H. JUNKER
| Synthetic gene networks in plant systems. In: W. Weber & M. Fussenegger (Eds.): Synthetic gene networks.
Methods in Molecular Biology (in press). |
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| 2011 |
SCHREIBER, F. & N. LE NOVÈRE
| ‘Exchange formats for systems biology - SBGN’. In: Dubitzky, W., O. Wolkenhauer, K.-H. Cho and H. Yokota (Eds.): Encyclopedia of Systems Biology.
Springer (to appear). |
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| 2011 |
MEHLHORN, H. & F. SCHREIBER
| ‘Small-world property of networks’. In: Dubitzky, W., O. Wolkenhauer, K.-H. Cho and H. Yokota (Eds.): Encyclopedia of Systems Biology.
Springer (to appear). |
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| 2011 |
VAN IERSEL, M.P., S.E. BOYD, F. BERGMANN, S. MOODIE, F. SCHREIBER, T. CZAUDERNA, E. DEMIR, N. LE NOVERE, A. SOROKIN, H. MI, A. LUNA, U. DOGRUSOZ, Y. MATSUOKA, A. FUNAHASHI, H. KITANO, M.I. ALADJEM, M.L. BLINOV & A.C. VILLEGER
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| 2011 |
CZAUDERNA, T. & F. SCHREIBER
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| 2010 |
SCHREIBER, F.
| Representation and analysis of biological networks with the Vanted toolsuite, in R. Hofestädt and N. Kolchanov (eds.), German/Russian Network of Computational Systems Biology, Berichte aus der Medizinischen Informatik und Bioinformatik.
Shaker Verlag, 47-50. |
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| 2010 |
KOSCHÜTZKI, D., B. H. JUNKER, J. SCHWENDER & F. SCHREIBER
| Structural analysis of metabolic networks based on flux centrality. Journal of Theoretical Biology 265 (3): 261‑269. |
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| 2010 |
CZAUDERNA, T., C. KLUKAS & F. SCHREIBER
| Editing, validating, and translating of SBGN maps.
Bioinformatics 26(18): 2340-2341. |
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| 2010 |
SHARBEL, T.F., M.-L. VOIGT, J. M. CORRAL, J. KUMLEHN, C. KLUKAS, F. SCHREIBER, H. VOGEL & B. ROTTER
| Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns.
The Plant Cell 22: 655-671. |
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| 2010 |
JUNKER, A., A. HARTMANN, F. SCHREIBER & H. BÄUMLEIN
| An engineer’s view on regulation of seed development.
Trends in Plant Science 15(6): 303-307. |
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| 2010 |
HIPPE, K., C. COLMSEE, T. CZAUDERNA, E. GRAFAHREND-BELAU, B.H. JUNKER, C. KLUKAS, U. SCHOLZ, F. SCHREIBER & S. WEISE
| Novel developments of the MetaCrop information system for facilitating systems biological approaches.
Journal of Integrative Bioinformatics 7(3): 125.1‑9. |
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| 2010 |
SCHARFE, M., R. PIELOT & F. SCHREIBER
| Fast multi-core based multimodal registration of 2D cross-sections and 3D datasets.
BMC Bioinformatics 11: 20.1-11. |
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| 2010 |
WEIDEMANN, W, C. KLUKAS, A. SIMM, F. SCHREIBER & R. HORSTKORTE
| Lessons from GNE-deficient embryonic stem cells: sialic acid biosynthesis is involved in proliferation and gene expression. Glycobiology 20(1): 107-117. |
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| 2010 |
KLUKAS, C.& F. SCHREIBER
| Integration of -omics data and networks for biomedical research.
Journal of Integrative Bioinformatics 7(2): 112.1-6. |
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| 2010 |
BANAEI MOGHADDAM, A.M., J. FUCHS, T. CZAUDERNA, A. HOUBEN & M. F. METTE
| Intraspecific hybrids of Arabidopsis thaliana revealed no gross alterations in endopolyploidy, DNA methylation, histone modifications and transcript levels.
Theor. Appl. Genet. 120(2): 215-226. |
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| 2010 |
SCHREIBER, F.& H. SCHWÖBBERMEYER
| Motifs in biological networks, In: Stumpf, M. & C. Wiuf (Eds.): Statistical and Evolutionary Analysis of Biological Network Data.
Imperial College Press/World Scientific 45-64. |
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| 2010 |
ALBRECHT, M., A. KERREN, K. KLEIN, O. KOHLBACHER, P. MUTZEL, W. PAUL, F. SCHREIBER & M. WYBROW
| On open problems in biological network visualization.
LNCS 5849: 256-267. |
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| 2010 |
BACHMAIER, C., U. BRANDES & F. SCHREIBER
| Biological Networks. In R. Tamassia (Ed.), Handbook of Graph Drawing and Visualization.
Chapman & Hall/CRC Press. in press. |
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| 2010 |
CZAUDERNA, T., C. KLUKAS & F. SCHREIBER
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| 2010 |
RHON, H., C. KLUKAS & F. SCHREIBER
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| 2010 |
PUCKNAT, K., H. ROHN & F. SCHREIBER
| Anaglyph Canvas3D. |
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| 2010 |
GRÄßLER, J., D. KOSCHÜTZKI & F. SCHREIBER
| CentiLib. |
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| 2010 |
HARTMANN, A., T. CZAUDERNA & F. SCHREIBER
| HTPheno. |
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| 2010 |
MEHLHORN, H. & F. SCHREIBER
| DBE2. |
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| 2009 |
SCHREIBER, F.
| Analyse und Visualisierung biologischer Netzwerke.
Informatik Spektrum 32(4): 301–309. |
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| 2009 |
GRAFAHREND-BELAU, E., F. SCHREIBER, D. KOSCHÜTZKI & B. H. JUNKER
| Flux balance analysis of barley seeds: a computational approach to study systemic properties of central metabolism.
Plant Physiology 149: 585–598. |
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| 2009 |
WHEELOCK, C.E., S. GOTO, L. YETUKURI, F.L. D’ALEXANDRI, C. KLUKAS, F. SCHREIBER & M. OREŠIÈ
| Bioinformatics strategies for the analysis of lipids.
Methods in Molecular Biology 580: 339-368. |
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| 2009 |
PIELOT R., U. SEIFFERT, B. MANZ, D. WEIER, F. VOLKE, F. SCHREIBER & W. WESCHKE
| Multimodal registration of NMR-volumes and histological cross-sections of barley grains on the Cell broadband engine. Proc. Intl. Conf. Computer Vision Theory and Applications - VISAPP'09 241-244. |
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| 2009 |
WEISE, S., C. COLMSEE, E. GRAFAHREND-BELAU, B.H. JUNKER, C. KLUKAS, M. LANGE, U. SCHOLZ & F. SCHREIBER
| An integration and analysis pipeline for systems biology in crop plant metabolism, Proc. Intl. Wsh. Data Integration in the Life Sciences – DILS’09, Lecture Notes Bioinformatics. |
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| 2009 |
GRAFAHREND-BELAU, E., B.H. JUNKER, C. KLUKAS, D. KOSCHÜTZKI, F. SCHREIBER & H. SCHWÖBBERMEYER
| Topology of plant metabolic networks, In: Schwender, J. (ed.): Plant Metabolic Networks.
Springer. 173–209. |
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| 2008 |
GRAFAHREND-BELAU, E., F. SCHREIBER, M. HEINER, A. SACKMANN, B.H. JUNKER, S. GRUNWALD, A. SPEER, K. WINDER & I. KOCH
| Modularization of biochemical networks based on lassification of Petri net t-invariants.
BMC Bioinformatics 9(1): 90. |
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| 2008 |
GRAFAHREND-BELAU, E., S. WEISE, D. KOSCHÜTZKI, U. SCHOLZ, B. H. JUNKER & F. SCHREIBER
| MetaCrop – A detailed database of crop plant metabolism.
Nucleic Acids Res. 36 (Database issue): D954–D958. doi:10.1093/nar/gkm835. |
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| 2008 |
DWYER, T., K. MARRIOTT, F. SCHREIBER, P. J. STUCKEY, M. WOODWARD & M. WYBROW
| Exploration of networks using overview and detail with constraint-based cooperative layout.
IEEE Transactions on Visualization and Computer Graphics 14(6): 1293-1300. |
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| 2008 |
D. C. Y. FUNG, S.-H. HONG, D. KOSCHÜTZKI, F. SCHREIBER & K. XU
| 2.5D Visualisation of Overlapping Biological Networks.
Journal of Integrative Bioinformatics 5(1). doi: 10.2390/biecoll-jib-2008-90. |
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| 2008 |
KOSCHÜTZKI, D. & F. SCHREIBER
| Centrality analysis methods for biological networks and their application to gene regulatory networks.
Gene Regulation and Systems Biology 2(1): 193-201. |
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| 2008 |
JUNKER, B. H. & F. SCHREIBER
| Analysis of Biological Networks.
Wiley Book Series on Bioinformatics. Wiley, 368 pages. |
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| 2008 |
R. HOFESTÄDT, J. KÖHLER, M. LANGE, U. SCHOLZ, F. SCHREIBER, P. VERRIER
| Integrative Bioinformatics: Proceedings of the 5th International Symposium on Integrative Bioinformatics 2008.
IMBio, 345 pages. |
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| 2008 |
KOSCHÜTZKI, D.
| Network Centralities. In Junker, B. H. & F. Schreiber: Analysis of Biological Networks.
Wiley Book Series on Bioinformatics. Wiley 65-84. |
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| 2008 |
SCHWÖBBERMEYER, H.
| Network Motifs. In Junker, B. H. & F. Schreiber: Analysis of Biological Networks.
Wiley Book Series on Bioinformatics. Wiley 85-111. |
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| 2008 |
GRAFAHREND-BELAU, E., B. H. JUNKER, C. KLUKAS, D. KOSCHÜTZKI, F. SCHREIBER & H. SCHWÖBBERMEYER
| Topology of plant metabolic networks. In Junker, B. H. & J. Schwender: Plant Metabolic Networks.
Springer. |
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| 2008 |
SCHREIBER, F.
| Visualization. In Keith, J.: Methods in Molecular Biology: Bioinformatics.
Humana Press 441-450. |
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| 2008 |
GRAFAHREND-BELAU, E., B. H. JUNKER, D. KOSCHÜTZKI, C. KLUKAS, S. WEISE, U. SCHOLZ & F. SCHREIBER
| Towards Systems Biology of Developing Barley Grains: a Framework for Modeling Metabolism. Proceedings Workshop on Computational Systems Biology (WCSB'08).
TICPS Series 41: 41-44. |
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| 2008 |
PIELOT, R., SEIFFERT, U., MANZ, B., WEIER, D., VOLKE, F., WESCHKE, W.
| 4D warping for analysing morphological changes in seed development of barley grains. Proceedings of the Third International Conference on Computer Vision Theory and Applications
VISAPP 2008. Volume (1) 335-340. |
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| 2008 |
BOLLENBECK, F. & U. SEIFFERT
| Fast registration-based automatic segmentation of serial section images for high-resolution 3-D plant seed modeling.
IEEE International Symposium on Biomedical Imaging: 352-355. |
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| 2008 |
THIEL, J., WEIER, D., SREENIVASULU, N., STRICKERT, M., WEICHERT, N., MELZER, M., CZAUDERNA, T., WOBUS, U., WEBER, H. & WESCHKE, W.
| Different Hormonal Regulation of Cellular Differentiation and Function in Nucellar Projection and Endosperm Transfer Cells: A Microdissection-Based Transcriptome Study of Young Barley Grains.
Plant Physiologie 148(3): 1436-1452. |
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| 2007 |
KLUKAS, C. & F. SCHREIBER
| Dynamic exploration and editing of KEGG pathway diagrams. Bioinformatics 23(3): 344-350. |
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| 2007 |
KOSCHÜTZKI, D., H. SCHWÖBBERMEYER & F. SCHREIBER
| Ranking of network elements based on functional substructures. J. Theor. Biol. 248(3): 471-479. |
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| 2007 |
TELGKAMP, M., KOSCHÜTZKI, D., H. SCHWÖBBERMEYER & F. SCHREIBER
| Community-based linking of biological network resources: databases, formats and tools. J. Integrat. Bioinformatics 4(3): 141-152. |
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| 2007 |
ROLLETSCHEK, H., T.H. NGUYEN, R.E. HÄUSLER, T. RUTTEN, C. GÖBEL, I. FEUSSNER, R. RADCHUK, A. TEWES, B. CLAUS, C. KLUKAS, U. LINEMANN, H. WEBER, U. WOBUS & L. BORISJUK
| Antisense inhibition of the plastidial glucose-6-phosphate/phosphate translocator in Vicia seeds shifts cellular differentiation and promotes protein storage. Plant J. 51(3): 468-484. |
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| 2008 |
JUNKER, B.H., J. LONIEN, L.E. HEADY, A. ROGERS, J. SCHWENDER
| Parallel determination of enzyme activities and in vivo fluxes in oilseed embryos reveals minor reprogramming of metabolism upon change in growth conditions. Phytochemistry 68: 2232-2242. |
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| 2007 |
TELGKAMP, M.
| Generating networks from data sources. Diplomarbeit, Martin-Luther-Universität Halle-Wittenberg, Halle. |
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| 2007 |
WOBUS, U., H.-P. MOCK, C. PIETSCH, V. RADCHUK, M. RÖDER, F. SCHREIBER, U. SEIFFERT, N. SREENIVASULU, M. STRICKERT, W. WESCHKE, K. WITZEL
| GABI-SEED: Genetische Grundlagen komplexer agronomischer Merkmale im Getreidekorn entschlüsseln. GenomXpress, Sonderausgabe 3: 19. |
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| 2007 |
WESCHKE, W., H.-P MOCK, C. PIETSCH, V. RADCHUK, M.S. RÖDER, F. SCHREIBER, U. SEIFFERT, N. SREENIVASULU, M. STRICKERT, K. WITZEL & U. WOBUS
| "Genetical Genomics" der Gerstenkornentwicklung - von der Genexpression zu landwirtschaftlich bedeutsamen Merkmalen. GenomXPress 1: 12-16. |
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| 2006 |
WEISE, S., I. GROSSE, C. KLUKAS, D. KOSCHÜTZKI, U. SCHOLZ, F. SCHREIBER & B.H. JUNKER
| Meta-ALL: a system for managing metabolic pathway information. BMC Bioinformatics 23(7): 465. |
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| 2006 |
AHMED A., T. DWYER, M. FORSTER, X. FU, J. HO, S.-H. HONG, D. KOSCHÜTZKI, C. MURRAY, N. S. NIKOLOV, R. TAIB, A. TARASSOV, K. XU:
| GEOMI: GEOmetry for Maximum Insight. Proc. Intl. Symp. Grap Drawing (GD 2005), Springer LNCS 3843: 468-479. |
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| 2006 |
DWYER, T., S.-H. HONG, D. KOSCHÜTZKI, F. SCHREIBER & K. XU:
| Visual analysis of network centralities. Proc. Asia Pacific Symp. Information Visualisation (APVIS 2006), CRPIT 60: 189-197. |
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| 2006 |
JUNKER, B., C. KLUKAS & F. SCHREIBER:
| VANTED: A system for advanced data analysis and visualization in the context of biological networks. BMC Bioinformatics 7: 109. |
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| 2006 |
JUNKER, B., C. KLUKAS & F. SCHREIBER:
| VANTED: Datenauswertung im Netzwerk-Kontext. GenomeXPress 1: 16-18. |
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| 2006 |
JUNKER, B.H., D. KOSCHÜTZKI & F. SCHREIBER:
| Exploration of biological network centralities with CentiBiN. BMC Bioinformatics 7(1): 219. |
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| 2006 |
JUNKER, B.H., D. KOSCHÜTZKI & F. SCHREIBER:
| Kinetic Modeling with the systems biology modelling environment SyBME. J. of Integrative Bioinformatics 1: 0018. |
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| 2006 |
JUNKER, B.H., R. WUTTKE, A. NUNES-NESI, D. STEINHAUSER, N. SCHAUER, D. BÜSSIS, L. WILLMITZER & A.R. FERNIE:
| Enhancing vacuolar sucrose cleavage within the potato tuber has only minor effects on metabolism. Plant and Cell Physiology 47(2): 277-289. |
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| 2006 |
KLUKAS, C., F. SCHREIBER & H. SCHWÖBBERMEYER:
| Coordinated perspectives and enhanced force-directed layout for the analysis of network. Proc. Asia Pacific Symp. Information Visualisation (APVIS 2006), CRPIT 60: 39-48. |
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| 2006 |
KLUKAS, C., B.H. JUNKER & F. SCHREIBER
| The VANTED software system for transcriptomics, proteomics and metabolomics analysis. Journal of Pesticide Science 31(3): 289-292. |
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| 2006 |
SCHREIBER, F.
| Visual analysis of biological networks. Habilitation, Universität Passau, Passau. |
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| 2006 |
AST, V.
| Interaktive Visualisierungsverfahren zur Untersuchung netzbasierter Bäume. Diplomarbeit, Martin-Luther-Universität Halle-Wittenberg, Halle. |
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| 2005 |
JACOB, R., D. KOSCHÜTZKI, K. A. LEHMANN, L. PEETERS & D. TENFELDE-PODEHL:
| Algorithms for Centrality Indices. In: BRANDES, U. & T. ERLEBACH (Eds.): Network Analysis: Methodological Foundations, Springer LNCS 3418: 62-82. |
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| 2005 |
KLUKAS, C., D. KOSCHÜTZKI & F. SCHREIBER:
| Graph Pattern Analysis with PatternGravisto. Journal of Graph Algorithms and Applications 9(1): 19-29. |
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| 2005 |
KOCH, I., B. H. JUNKER & M. HEINER:
| Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber. Bioinformatics, 21(4):1219-1226. |
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| 2005 |
KOSCHÜTZKI, D., K. A. LEHMANN, D. TENFELDE-PODEHL & O. ZLOTOWSKI:
| Advanced Centrality Concepts. In: BRANDES, U. & T. ERLEBACH (Eds.): Network Analysis: Methodological Foundations, Springer LNCS 3418: 83-111. |
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| 2005 |
KOSCHÜTZKI, D., K. A. LEHMANN, L. PEETERS, S. RICHTER, D. TENFELDE-PODEHL & O. ZLOTOWSKI:
| Centrality Indices. In: BRANDES, U. & T. ERLEBACH (Eds.): Network Analysis: Methodological Foundations, Springer LNCS 3418: 16-61. |
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| 2005 |
ROLLETSCHEK, H., R. RADCHUK, C. KLUKAS, F. SCHREIBER, U. WOBUS & L. BORISJUK:
| Evidence of a key role for photosynthetic oxygen release in oil storage in developing soybean seeds. New Phytologist 167: 777-786. |
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| 2005 |
SCHREIBER, F. & H. SCHWÖBBERMEYER:
| Frequency Concepts and Pattern Detection for the Analysis of Motifs in Networks. Transactions on Computational Systems Biology 3 (LNBI 3737): 89-104. |
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| 2005 |
SCHREIBER, F. & H. SCHWÖBBERMEYER:
| MAVisto - A Tool for the Exploration of Network Motifs. Bioinformatics 21(17): 3572-3574. |
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| 2004 |
BORISJUK, L., M.-R. HAJIREZAEI, C. KLUKAS, H. ROLLETSCHEK AND F. SCHREIBER
| Integrating Data from Biological Experiments into Metabolic Networks with the DBE Information System. In Silico Biology 5: 0011. |
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| 2004 |
BRANDENBURG, F.J., M. FORSTER, A. PICK, M. RAITNER AND F. SCHREIBER
| BioPath - Exploration and Visualization of Biochemical Pathways. In: M. Jünger and P. Mutzel (Eds.), Graph Drawing Software, Springer Mathematics and Visualization Series, 215-236. |
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| 2004 |
BRANDES, U., T. DWYER AND F. SCHREIBER
| Visual Triangulation of Network-based Phylogenetic Trees. Proc.Joint EUROGRAPHICS - IEEE TCVG Symp. on Visualization (VisSym'04), 75-84. |
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| 2004 |
DWYER, T. AND F. SCHREIBER
| Optimal Leaf Ordering for Two and a Half Dimensional Phylogenetic Tree Visualisation. Proc.Australasian Symp. on Information Visualisation (InVis.au 2004), CRPIT 35: 109-115. |
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| 2004 |
DWYER, T., H. ROLLETSCHEK AND F. SCHREIBER
| Representing Experimental Biological data in Metabolic Networks. Proc.Asia-Pacific Bioinformatics Conf. (APBC 2004), CRPIT 29: 13-20. |
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| 2004 |
FRIEDRICH, C. AND F. SCHREIBER
| Flexible Layering in Hierarchical Drawings with Nodes of Arbitrary Size. Proc.Australasian Computer Science Conf. (ACSC 2004), CRPIT 26: 369-376. |
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| 2004 |
KOSCHÜTZKI, D. AND F. SCHREIBER
| Comparison of Centralities for Biological Networks. Proc.German Conf.Bioinformatics (GCB'04), LNI P-53: 199-206. |
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| 2004 |
SCHREIBER, F. AND H. SCHWÖBBERMEYER
| Towards Motif Detection in Networks: Frequency Concepts and Flexible Search. Proc.Intl.Workshop Network Tools and Applications in Biology (NETTAB'04), 91-102. |
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| 2004 |
BRANDES, U., T. DWYER & F. SCHREIBER
| Visual Understanding of Metabolic Pathways Across Organisms Using Layout in Two and a Half Dimensions. Journal of Integrative Bioinformatics 1: 0002. |
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bioinformatics, network analysis, information visualisation, graph theory and algorithms, graph layout
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