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IPK Gatersleben > Research > Dept. Physiology and Cell Biology > Yeast Genetics
 

 

Yeast Genetics
Head: Prof Gotthard Kunze
Tel: +49 (0)39482 5247/5346
Fax: +49 (0)39482 5366
Email: kunzeg@ipk-gatersleben.de

Research Interest
The major objective of the research group Yeast Genetics is develop yeast as a model organism for the analysis of osmo-tolerance, and as an expression platform for heterologous gene expression. The latter is being exploited for functional gene analysis, as well as for the production of heterologous proteins. The yeast species used include both Saccharomyces cerevisiae and non-Saccharomyces yeasts such as Arxula adeninivorans. Yeasts and filamentous fungi also constitute a source of genes which could be used for metabolic redesign of plants, in order to engineer improved quality of end products, or to develop recombinant microbes for use as biosensors of environmental pollution.
The research on this topic based on our special expertise in development and application of various host vector systems based on non-conventional yeasts like Arxula adeninivorans, Hansenula polymorpha, Debaryomyces hansenii and D. polymorphus, the analysis of pathways which are unknown but of biotechnological interest and the characterization of key pathways, which play the decisive role for occurrence of exceptional properties in yeasts and filamentous fungi. The yeast A. adeninivorans for instance exhibit an extremely high level of osmo-resistance, and is particularly suitable as model organisms for a detailed analysis of this phenomenon. Our activities focus on the analysis of the key pathways which is subject to this tolerance, and the identification of compatible solutes. In addition the same yeast is able to assimilate and ferment many different substances like tannin, pyrogallol, protocatechuic acid, purine and uric acid. As the metabolism of these compounds bases on pathways that are either completely unknown or only partially characterised (e.g., tannin and purine biodegradation) they are in the focus of the group activities.
The exploitation of yeasts and fungi as a source of genes encoding proteins of biotechnological interest has been targeted predominantly at those which may have an impact on the quality of plant products. Some specific examples are the A. adeninivorans-derivedgenes encoding enzymes with broad substrate specificity such as tannase, acid phosphatase and lipase. Based on differences in substrate specificity, native and recombinant anthocyanases from various yeast species will be analysed. These enzymes are particularly suitable for decolorising anthocyanin-containing products such as grape extract.
In addition yeast strains are redesigned with new metabolic pathways in order to synthesize products of industrial interest. A first example is an A. adeninivorans strain which is able to synthesized polyhydroxyalkanoate (PHA), a biodegradable plastic. The resulting transformants accumulate high amounts of both poly-3-hydroxybutyrate (PHB) and poly-3-hydroxyvalerate (PHV), depending on the culture conditions imposed.
Another established direction in the research group surrounds the development of biosensors. The validation of a microbial estrogen sensor based on recombinant A. adeninivorans which includes the human estrogen receptor hERa is in progress. As the detection limit for 17b-estradiol as been decreased to 2ng/l, this sensor is currently the most sensitive available for endocrine-disrupting substances. Another biosensor project uses DNA and piezo-crystals for species-specific DNA-analysis. This will be developed and adapted for the taxonomic analysis of fungi (arbuscular mycorrhiza) as well as for identification of mycorrhiza residing on plant roots.
More information on these projects and other details are available in the Annual Reports of the institute.
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Recent References
201220112010200920082007200620052004
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[ ^ ] 2011
2011 BÖER,E., F.S. BREUER, M. WENIGER, S. DENTER, M. PIOTEK & G. KUNZE

Large-scale production of tannase using the yeast Arxula adeninivorans. Appl. Microbiol. Biotechnol. : doi: 10.1007/s00253-011-3320-5. 

2011 CHELIKANI,V., F.J. RAWSON, F. BARRIE, G. KUNZE, N. PASCO, R. COONERATNE & K.H.R. BARONIAN Electrochemical detection of oestrogen binding protein interaction with oestrogen in Candida albicans cell lysate. Biosensors Bioelectron. 26: 3737-3741.
2011 HASELETT, N.D., F.J. RAWSON, F. BARRIE, G. KUNZE, N: PASCO, R. GOONERATNE & K.H.R. BARONIAN Characterisation of yest mirobial fuel cell with the yeast Arxula adeninivorans as the biocatalyst. Biosensors Bioelectron. 26: 3742-3747.
2011 SINGH, B., G. KUNZE & T. SATYANARAYANA

Developments in biochemical aspects and biotechnological applications of microbial phytases. Biotechnol. Mol. Biol. Rev. 6: 69-87.

2011 GIERSBERG; M., K. FLOHRSCHÜTZ, K. BARONIAN & G.KUNZE Arxula adeninivorans (Blastobotrys adeninivorans) - an imperfect dimorphic yeast of biotechnological potential. In: Microorganisms in sustainable agriculture and biotechnology (Eds. Satyanarayana, T., B. Johri, A. Prakash) Springer Verlag, Berlin - Heidelberg - New York. in press.
[ ^ ] 2010
2010 WITZEL, K., A. WEIDNER, G.K. SURABHI, R.K. VARSHNEY, G. KUNZE, G.H. BUCK-SORLIN, A. BÖRNER & H.-P. MOCK
Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination. Plant Cell Environ. 33: 211-222.
2010 SIETMANN, R., R. UEBE, E. BÖER, R. BODE, G. KUNZE & F. SCHAUER
Novel metabolic routes during the oxidation of hydroxylated aromatic acids by the yeast Arxula adeninivorans. J. Appl. Microbiol. 108: 789-799.
2010 KAUR, P., B. SINGH, E. BÖER, N. STRAUBE, M. PIONTEK, T. SATYANARAYANA & G. KUNZE. Pphy - A cell-bound phytase from the yeast Pichia anomala: Molecular cloning of the gene PPHY and characterization of the recombinant enzyme. J  Biotechnol 149: 8-15.
2010 KNABBEN, I., L. REGESTEIN, C. GRUMBACH, S. STEINBUSCH, G. KUNZE & J. BÜCHS Online determination of viable biomass up to very high cell densities in Arxula adeninivorans fermentations using an impedance signal. J Biotechnol149: 60-66.
2010 KAUR, P., B. SINGH, E. BÖER, N. STRAUBEA, M. PIONTEKC, T. SATYANARAYANAB, G. KUNZE Pphy—A cell-bound phytase from the yeast Pichia anomala: Molecular cloning of the gene PPHY and characterization of the recombinant enzyme. Journal of Biotechnology 149:8-15.
2010 KAISER, C., S. UHLIG, T. GERLACH, M. KÖRNER, K. SIMON, K. KUNATH; K: FLORSCHUTZ, K. BARONIAN, G. KUNZE Evaluation and validation of a novel Arxula adeninivorans estrogen screen (nAES) assay and its application in analysis of wastewater, seawater, brakish water and urine. Science of the total enviroment, Elsevier 408: 6017-6026.
[ ^ ] 2009
2009 BÖER,E., A.SCHRÖTER, R.BODE, M. PIONTEK & G.KUNZE. Characterization and expression analysis of a gene cluster for  nitrate  assimilation from the yeast Arxula adeninivorans. Yeast 26: 83-93.
2009 BÖER, E. ,G. EL METABTEB, A. EL FIKI, P. BRÜCKNER, T. WARTMANN, M. PIONTEK & G. KUNZE. The MAPk ASTE11  is involved in the maintenance of cell wall integrity and in filamentation in Arxula adeninivorans, but not in adaption to hypertonic stess. FEMS Yeast Res.9 : 468-477.
2009 BÖER, E., R. BODE, H.P. MOCK, M. PIONTEK & G. KUNZE. Atan I p - an extracellular tannase from dimorphic yeast Arxula adeninivorans: molecular cloning of the ATAN I gene and characterization of the recomibinant enzyme. Yeast 26: 323-337.
2009 BÖER, E., M. PIONTEK, G. KUNZE. Xplor 2 - an optimized transformation / expression system for recombinant protein prodution in the yeast Arxula adeninivorans Appl. Microbiol. Biotechnol. 84: 583-594.
2009 BÖER, E., G. STEINBORN, K. TAG, M. KÖRNER, G. GELLISSEN & G. KUNZE. Arxula adeninivorans (Blastobotrys adeninivorans) - a dimorphic qeast of great biotechnological potential. in: Satyanarayana, T. & G. kunze (Eds.): Diversity and potential biotechnoligical applications in yeasts. Springer-Verlag, Berlin-Heidelberg-New York, pp. 615-634.
2009 STEINBORN, G., G. KUNZE & G. GELLISSEN A wide range integrative expression vector (CoMedTM) system for yeasts. in: Satyanarayana, T. &G. kunze (Eds.): Diversity and potential biotechnological applications in yeasts. Springer-verlag, Berlin-Heidelberg-New York, pp. 357-368
2009 KUNZE, G., A.H. HANG & G. GELLISSEN Hansenula polymorpha (Pichia angusta) - Biology and application. In: Satyanarayana, T. & G. Kunze (Eds.): Diversity and potential biotechnological applications in yeasts. Springer-Verlag. Berlin-Heidelberg-New York, pp. 47-62.
2009 SATYANARAYANA, T & G. KUNZE Diversity and potential biotechnological applications in yeast. Springer-Verlag, Berlin-Heidelberg-New York.
[ ^ ] 2008
2008 MELMER, G., G. KUNZE & G. GELLISSEN Recombinant Vaccine Production in Yeast. Supplement to Biopharm International: 8-13.
2008 KUNZE, G., M. KÖRNER, S. UHLIG & K. SIMON Mit biologischem Testsystem gegen die Wasserverschmutzung. GIT Labor-Fachzeitschrift 4: 374-375.
2008 KÖRNER, M., S. UHLIG, K. HEIDE, K. SIMON, C. KAISER, K. KUNATH, K. FLORSCHÜTZ, K. SUCKAU, E. FISCHER & G. KUNZE

Detection of estrogenic activities in environmental samples, urine and milk by a novel yeast biosensor. In: Renewable resources – obtaining and use. Nova Sci. Publ., New York, pp.17-26.

2008 KUNZE, G., M. KÖRNER, S. UHLIG & K. SIMON
Sibirischer Überlebenskünstler. GENIAL – Biotechnologie im Alltag, pp.14-15.
2008 KAISER, C., M. KÖRNER, S. UHLIG, K. SIMON, K. KUNATH, K. SUCKAU & G. KUNZE
 Hormon-Biosensorsystem – schneller und eindeutiger Nachweis von Hormonen in Urin, Blutserum und Milch bei Haustieren. 14. Mitteldeutscher Schweine-Workshop in Bernburg – Wissenschaftliche Beiträge der Hochschule Anhalt,  pp.82-88.
[ ^ ] 2007
2007 KAUR, P., A. LINGNER, B. SINGH, E. BÖER, J. POLAJEVA, G. STEINBORN, R. BODE, G. GELLISSEN, T. SATYANARAYANA & G. KUNZE APHO1 from the yeast Arxula adeninivorans encodes an acid phosphatase of broad substrate specificity. Antonie van Leeuwenhoek 91: 45-55.
2007 TAG, K., K. RIEDEL, H.-J. BAUER, G. HANKE, K.H.R. BARONIAN & G. KUNZE Amperometric detection of Cu2+ by yeast biosensors using flow injection analysis (FIA). Sensors & Actuators B 122: 403-409.
2007 EL FIKI, A. G. EL METABTEB, C. BELLEBNA, T. WARTMANN, R. BODE, G. GELLISSEN & G. KUNZE The Arxula adeninivorans ATAL gene encoding transaldolase-gene characterization and biotechnological exploitation. Appl. Microbiol. Biotechnol. 74: 1292-1299.
2007 KAUR, P., G. KUNZE & T. SATYANARAYANA Yeast Phytases: Present Scenario and Future Perspectives. Crit Rev Biotechnol 27: 93-109.
2007 MINOCHA, N., P. KAUR, T. SATYANARAYANA & G. KUNZE Acid phosphatase production by recombinant Arxula adeninivorans. Appl. Microbiol. Biotechnol. 76: 387-393.
2007 STEINBORN, G., T. WARTMANN, G. GELLISSEN & G. KUNZE Construction of an Arxula adeninivorans host-vector system based on trp1 complementation. J. Biotechnol. 127: 392-401.
2007 STEINBORN, G., G. GELLISSEN & G. KUNZE A novel vector element providing multicopy vector integration in Arxula adeninivorans. FEMS Yeast Res. 7: 1197-1205.
2007 BÖER, E., G. STEINBORN, A. MATROS, H.P. MOCK, G. GELLISSEN & G. KUNZE Production of interleukin-6 in Arxula adeninivorans, Hansenula polymorpha and Saccharomyces cerevisiae applying the wide range vector (CoMedTM) system to stimultaneous comparative assessment. FEMS Yeast Res. 7: 1181-1187.
2007 BÖER, E., G. STEINBORN, G. KUNZE & G. GELLISSEN Yeast expression platforms. Appl. Microbiol. Biotechnol. 77: 513-523.
[ ^ ] 2006
2006 HAHN, T., K. TAG, K. RIEDEL, S. UHLIG, K. BARONIAN, G. GELLISSEN & G. KUNZE A novel estrogen sensor based on recombinant Arxula adeninivorans cells. In: Biosens and Bioelectron 21: 2078-2085.
2006 KUNZE, G. & K. RIEDEL Microbial biosensors for toxicity testing. In: RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (Eds.): Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, pp.105-129.
2006 RIEDEL, K. & G. KUNZE Fundamentals of microbial biosensors. In: RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (Eds.): Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, pp.1-19.
2006 RIEDEL, K. & G. KUNZE Yeasts as microbial components for determination of Biochemical Oxygen Demand (BOD). In: RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (Eds.): Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, pp.73-86.
2006 RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (EDS.) Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, 253 pp.
2006 STEINBORN, G., E. BÖER, A. SCHOLZ, K. TAG, G. KUNZE & G. GELLISSEN Application of a wide-range yeast vector (CoMedtrade mark) system to recombinant protein production in dimorphic Arxula adeninivorans, methylotrophic Hansenula polymorpha and other yeasts. Microbial Cell Factories 14: 33.
2006 STEINBORN, G., T. WARTMANN, G. GELLISSEN & G. KUNZE Construction of an Arxula adeninivorans host-vector system based on trp1 complementation. J Biotechnol 127: 392-401.
2006 TAG, K., T. HAHN, K. RIEDEL & G. KUNZE Assays and microbial biosensors for detection of endocrine disruptors. In: RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (Eds.): Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, pp.211-228.
2006 TAG, K., K. RIEDEL, K.H.R. BARONIAN & G. KUNZE Determination of heavy metal ions by microbial biosensors. In: RIEDEL, K., G. KUNZE & K.H.R. BARONIAN (Eds.): Biosensors and bioassays based on microorganisms. Research Signpost, Trivandrum/India, pp.193-209.
[ ^ ] 2005
2005 BÖER, E., G. GELLISSEN & G. KUNZE Arxula adeninivorans. In: GELLISSEN, G. (Ed.): Production of recombinant proteins: Novel microbial and eukaryotic expression systems. WILEY-VCH, Weinheim, pp.89-110. 
2005 BÖER, E., H. P. MOCK, R. BODE, G. GELLISSEN & G. KUNZE An extracellular lipase from the dimorphic yeast Arxula adeninivorans molecular cloning of the ALIP1 gene and characterization of the purified recombinant enzyme. Yeast 22: pp.523-535.
2005 BÖER, E., T. WARTMANN, S. SCHMIDT, R. BODE, G. GELLISSEN & G. KUNZE Characterization of the AXDH gene and the encoded xylitol dehydrogenase from the dimorphic yeast Arxula adeninivorans. Antonie van Leeuwenhoek 87: 233-243.
2005 BÖER, E., Y. TERENTIEV, T. WARTMANN, G. GELLISSEN & G. KUNZE The Arxula adeninivorans based expression platform. In: SATYANARAYANA, T. & B. N. JOHRI (Eds.), Microbial diversity: Current Perspectives and Potential Applications. I.K. International Pvt. Ltd., New Delhi-Mumbai-Bangalore,  pp. 947-965.
2005 GELLISSEN, G., G. KUNZE, C. GAILLARDIN, J.M. CREGG, E. BERNARDI, M. VEENHUIS & I. VAN DER KLEI New yeast expression platforms based on methylotrophic Hansenula polymorpha and Pichia pastoris and on dimorphic Arxula adeninivorans and Yarrowia lipolytica – a comparison. FEMS Yeast Res 5: 1079-1096 .
2005 KLABUNDE, J., G. KUNZE, G. GELLISSEN & C.P. HOLLENBERG Wide-range integrative expression vectors for fungi, based on ribosomal DNA elements. In: GELLISSEN, G. (Ed.): Production of recombinant proteins: Novel microbial and eukaryotic expression systems. WILEY-VCH, Weinheim, 273-286.
2005 STEINBORN, G., G. GELLISSEN & G. KUNZE Assessment of Hansenula polymorpha and Arxula adeninivorans-derived rDNA-targeting elements for the design of Arxula adeninivorans expression vectors. FEMS Yeast Res 5: 1047-1054 . 
2005 STEINBORN, G., M.-R. HAJIREZAEI & J. HOFEMEISTER bac genes for recombinant bacilysin and anticapsin production in Bacillus host strains. Arch. Microbiol. 183: 71-79.
[ ^ ] 2004
2004 BÖER, E, T. WARTMANN, B. LUTHER, R. MANTEUFFEL, R. BODE, G. GELLISSEN & G. KUNZE Characterization of the AINV gene and the encoded invertase from the dimorphic yeast Arxula adeninivorans. Antonie van Leeuwenhoek 86: 121-134.
2004 BÖER, E., T. WARTMANN, K. DLUBATZ, G. GELLISSEN & G. KUNZE Characterization of the Arxula adeninivorans AHOG1 gene and the encoded mitogen-activated protein kinase. Curr. Genet. 46: 269-276.
2004 KLABUNDE, J., G. KUNZE, G. GELLISSEN & C. P. HOLLENBERG Wide-range integrative expression vectors for fungi, based on ribosomal DNA elements. WILEY-VCH Production of recombinant proteins. Novel Microbial and Eukaryotic Expression Systems, pp. 273-286.
2004 TERENTIEV, Y., A. H. PICO, E. BÖER, T. WARTMANN, J. KLABUNDE, U. BREUER, W. BABEL, M. SUCKOW, G. GELLISSEN & G. KUNZE A wide-range integrative yeast expression vector system based on Arxula adeninivorans-derived elements. J. Ind. Microbiol. Biotechnol. 31: 223-228.
2004 TERENTIEV, Y., U. BREUER, W. BABEL & G. KUNZE Non-conventional yeasts as producers of polyhydroxyalkanoates – genetic engineering of Arxula adeninivorans. Appl. Microbiol. Biotechnol. 64: 376-381.
2004 VAN DER GRAAFF, E., P. HOOYKAAS, W. LEIN, J. LERCHL, G. KUNZE, U. SONNEWALD & R. BOLDT Molecular analysis of  "de novo“ purine biosynthesis in solanaceous species and in Arabidopsis thaliana. Frontiers in Biosci 9: 1803-1816.
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Staff
scientific staff
Chamas, Alexandre +49 (0)39482 5401
Florschuetz, Dr. Kristina +49 (0)39482 5204
Gerlach, Torsten +49 (0)39482 5376
Giersberg, Dr. Martin +49 (0)39482 5241
Haehnel, Dr. Urs +49 (0)39482 5135
Jankowska, Dagmara +49 (0)39482 5165
Kasprzak, Jakub
Kunze, Prof. Gotthard +49 (0)39482 5247
Minh Ha, Pham Thi +49 (0)39482 5376
Schwarz, Maria +49 (0)39482 5350
Sedzielewska, Kinga +49 (0)39482 5235
Trautwein, Anke +49 (0)39482 5377
Worch, Dr. Sebastian +49 (0)39482 5375
staff or visitors
Appel, Andrea +49 (0)39482 5119
Behrens, Anne-Kathrin
Bohlmann, Heidrun +49 (0)39482 5520
Franz, Ruth +49 (0)39482 5377
Krummel, Kristian
Kunze, Marion
Nieter, Annabel +49 (0)39482 5376
Oswald, Gudrun +49 (0)39482 5478
Riechen, Jan +49 (0)39482 5568
Schmeling, Ilka +49 (0)39482 5234
Schroeter, Anja +49 (0)39482 5135
Schweigert, Undine +49 (0)39482 5376
Senkel, Roy-Arne
Stegmann, Sylvane +49 (0)39482 5478
Teichmann, Nicole +49 (0)39482 5204
Zielke, Martin
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Keywords
Arxula adeninivorans, dimorphism, salt resistance, secretion, heterologous gene expression, functional analyses of genes, Saccharomyces cerevisiae, thermoresistance, ABC-transporter, microbial biosensors