Publications

Autoren Titel
2021
Hoang P T N, Rouillard J M, Macas J, Kubalová I, Schubert V, Schubert I Limitation of current probe design for oligo-cross-FISH, exemplified by chromosome evolution studies in duckweeds. Chromosoma (2021) Epub ahead of print. dx.doi.org/10.1007/s00412-020-00749-2
Kubalová I, Schmidt Černohorská M, Huranová M, Weisshart K, Houben A, Schubert V A protocol to expand plant nuclei. In: Guichard P, Hamel V (Eds.): Expansion microscopy for cell biology. (Series: methods in cell biology, Vol. 161) : Academic Press (2021) 197-216. doi.org/10.1016/bs.mcb.2020.06.007 ISBN 9780128208076
Municio C, Antosz W, Grasser K, Kornobis E, van Bel M, Eguinoa I, Coppens F, Bräutigam A, Lermontova I, Bruckmann A, Zelkowska K, Houben A, Schubert V The Arabidopsis condensin CAP-D subunits arrange interphase chromatin. New Phytol. (2021) Epub ahead of print. dx.doi.org/10.1111/nph.17221
2020
Adamusová K, Khosravi S, Fujimoto S, Houben A, Matsunaga S, Fajkus J, Fojtová M Two combinatorial patterns of telomere histone marks in plants with canonical and non-canonical telomere repeats. Plant J. 102 (2020) 678-687. dx.doi.org/10.1111/tpj.14653
Ahn Y-J, Cuacos M, Ayoub M A, Kappermann J, Houben A, Heckmann S In planta delivery of chemical compounds into barley meiocytes – EdU as compound example. In: Pradillo M, Heckmann S (Eds.): Plant Meiosis: methods and protocols. (Series: Methods in molecular biology, Vol. 2061) New York, NY: Humana Press (2020) 381-402. dx.doi.org/10.1007/978-1-4939-9818-0_27 978-1-4939-9817-3
Antonova E, Fuchs J, Röder M S Influence of chronic man-made pollution on Bromus inermis genome size. Russ. J. Ecol. 51 (2020) 337-344. dx.doi.org/10.1134/S1067413620040025
Baez M, Kuo Y T, Dias Y, Souza T, Boudichevskaia A, Fuchs J, Schubert V, Vanzela A L L, Pedrosa-Harand A, Houben A Analysis of the small chromosomal Prionium serratum (Cyperid) demonstrates the importance of reliable methods to differentiate between mono- and holocentricity. Chromosoma 129 (2020) 285-297. dx.doi.org/10.1007/s00412-020-00745-6
Bär A, Bennert H W, Czichowski H-J, Fuchs J, Gausmann P, Ivanova D, Jäger W, Neuroth R, Thiel H, Thiemann R, Zenner G Der Dryopteris affinis-Komplex (Dryopteridaceae) im Harz – Identifizierung, Verbreitung, Ökologie. Tuexenia 40 (2020) 345-371. dx.doi.org/10.14471/2020.40.011
Beseda T, Cápal P, Kubalová I, Schubert V, Doležel J, Šimková H Mitotic chromosome organization: General rules meet species-specific variability. Comput. Struct. Biotechnol. J. 18 (2020) 1311-1319. doi.org/10.1016/j.csbj.2020.01.006
Beying N, Schmidt C, Pacher M, Houben A, Puchta H CRISPR-Cas9-mediated induction of heritable chromosomal translocations in Arabidopsis. Nat. Plants 6 (2020) 638–645. dx.doi.org/10.1038/s41477-020-0663-x
Bog M, Sree K S, Fuchs J, Hoang P T N, Schubert I, Kuever J, Rabenstein A, Paolacci S, Jansen M A K, Appenroth K-J A taxonomic revision of Lemna sect. Uninerves (Lemnaceae). Taxon 69 (2020) 56-66. dx.doi.org/10.1002/tax.12188
Boller B, Harper J, Willner E, Fuchs J, Glombik M, Majka J, Mahelka V, Zhao C, Kopecký D Spontaneous natural formation of interspecific hybrids within the Festuca-Lolium complex. Biol. Plant. 64 (2020) 679-691. dx.doi.org/10.32615/bp.2020.111
Boudichevskaia A, Kumar G, Sharma Y, Kapoor R, Singh K Challenges and strategies for developing climate-smart apple varieties through genomic approaches. In: Kole C (Ed.): Genomic Designing of Climate - Smart Fruit Crops. : Springer International Publishing (2020) 23-71. dx.doi.org/10.1007/978-3-319-97946-5_2 ISBN 978-3-319-97945-8
Boudichevskaia A, Ruban A, Thiel J, Fiebig A, Houben A Tissue-specific transcriptome analysis reveals candidate genes associated with the process of programmed chromosome limination in Aegilops speltoides. Int. J. Mol. Sci. 21 (2020) 7596. doi.org/10.3390/ijms21207596
Chen E C H, Mathieu S, Hoffrichter A, Ropars J, Dreissig S, Fuchs J, Brachmann A, Corradi N More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi. Front. Plant Sci. 11 (2020) 912. dx.doi.org/10.3389/fpls.2020.00912
Dassau F Entwicklung einer CRISPR/Cas9 basierten Methode zur chromogenen in-situ Markierung spezifischer DNS. (Bachelor Thesis) Mittweida, Hochschule Mittweida (2020) 62 pp.
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Quantification of recombination rate and segregation distortion by genotyping and sequencing of single pollen nuclei. In: Pradillo M, Heckmann S (Eds.): Plant Meiosis: methods and protocols. (Series: Methods in molecular biology, Vol. 2061) New York, NY: Humana Press (2020) 281-300. dx.doi.org/10.1007/978-1-4939-9818-0_20 978-1-4939-9817-3
Dvořák Tomaštíková E, Rutten T, Dvořák P, Tugai A, Ptošková K, Petrovská B, van Damme D, Houben A, Doležel J, Demidov D Functional divergence of microtubule-associated TPX2 family members in Arabidopsis thaliana. Int. J. Mol. Sci. 21 (2020) 2183. dx.doi.org/10.3390/ijms21062183
Garavello M, Cuenca J, Dreissig S, Fuchs J, Navarro L, Houben A, Aleza P Analysis of crossover events and allele segregation distortion in interspecific citrus hybrids by single pollen genotyping. Front. Plant Sci. 11 (2020) 615. dx.doi.org/10.3389/fpls.2020.00615
Haberer G, Kamal N, Bauer E, Gundlach H, Fischer I, Seidel M A, Spannagl M, Marcon C, Ruban A, Urbany C, Nemri A, Hochholdinger F, Ouzunova M, Houben A, Schön C-C, Mayer K F X European maize genomes highlight intraspecies variation in repeat and gene content. Nat. Genet. 52 (2020) 950–957. dx.doi.org/10.1038/s41588-020-0671-9
Hesse S Cyto-molecular investigations to analyse the synaptonemal complex of rye standard and B chromosomes during meiosis and to evaluate the potential of a new FISH probe labelling system. (PhD Thesis, kumulativ) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III Agrar- und Ernährungswissenschaften, Geowissenschaften und Informatik (2020) 121 pp.
Hufnagel B, Marques A, Soriano A, Marques L, Divol F, Doumas P, Sallet E, Mancinotti D, Carrere S, Marande W, Arribat S, Keller J, Huneau C, Blein T, Aime D, Laguerre M, Taylor J, Schubert V, Nelson M, Geu-Flores F, Crespi M, Gallardo K, Delaux P M, Salse J, Berges H, Guyot R, Gouzy J, Peret B High-quality genome sequence of white lupin provides insight into soil exploration and seed quality. Nat. Commun. 11 (2020) 492. dx.doi.org/10.1038/s41467-019-14197-9
Ishii T, Juranić M, Maheshwari S, Bustamante F O, Vogt M, Salinas-Gamboa R, Dreissig S, Gursanscky N, How T, Demidov D, Fuchs J, Schubert V, Spriggs A, Vielle-Calzada J P, Comai L, Koltunow A M G, Houben A Unequal contribution of two paralogous CENH3 variants in cowpea centromere function. Commun. Biol. 3 (2020) 775. dx.doi.org//10.1038/s42003-020-01507-x
Khosravi S, Dreissig S, Schindele P, Wolter F, Rutten T, Puchta H, Houben A Live Cell CRISPR imaging in plant cells with a telomere-specific guide RNA. In: Heinlein M (Ed.): RNA Tagging: methods and protocols. (Series: Methods in molecular biology, Vol. 2166) New York, NY: Humana Press (2020) 343-356. dx.doi.org/10.1007/978-1-0716-0712-1_20 1940-6029 (Electronic)1064-3745 (Linking)
Khosravi S, Ishii T, Dreissig S, Houben A Application and prospects of CRISPR/Cas9-based methods to trace defined genomic sequences in living and fixed plant cells. Chromosome Res. 28 (2020) 7-17. dx.doi.org/10.1007/s10577-019-09622-0
Khosravi S, Schindele P, Gladilin E, Dunemann F, Rutten T, Puchta H, Houben A Application of aptamers improves CRISPR-based live imaging of plant telomeres. Front. Plant Sci. 11 (2020) 1254. dx.doi.org/10.3389/fpls.2020.01254
Kolesnikova T D, Kolodyazhnaya A V, Pokholkova G V, Schubert V, Dovgan V V, Romanenko S A, Prokopov D Y, Zhimulev I F Effects of mutations in the Drosophila melanogaster Rif1 gene on the replication and underreplication of pericentromeric heterochromatin in salivary gland polytene chromosomes. Cells 9 (2020) E1501. dx.doi.org/10.3390/cells9061501
Kubalová I, Schmidt Černohorská M, Huranová M, Weisshart K, Houben A, Schubert V Prospects and limitations of expansion microscopy in chromatin ultrastructure determination. Chromosome Res. 28 (2020) 355-368. dx.doi.org/10.1007/s10577-020-09637-y
Le Goff S, Keçeli B N, Jeřábková H, Heckmann S, Rutten T, Cotterell S, Schubert V, Roitinger E, Mechtler K, Franklin F C H, Tatout C, Houben A, Geelen D, Probst A V, Lermontova I The H3 histone chaperone NASPSIM3 escorts CenH3 in Arabidopsis. Plant J. 101 (2020) 71-86. dx.doi.org/10.1111/tpj.14518
Michael T P, Ernst E, Hartwick N, Chu P, Bryant D, Gilbert S, Ortleb S, Baggs E L, Sree K S, Appenroth K J, Fuchs J, Jupe F, Sandoval J P, Krasileva K V, Borisjuk L, Mockler T C, Ecker J, Martienssen R A, Lam E Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control. Genome Res. (2020) accepted. dx.doi.org/10.1101/gr.266429.120
Mifsud S, Troia A, Bennert H W, Fuchs J Reviewing the identity of the Maltese Polypodium (Polypodiaceae) – new evidence from morphology and flow cytometry. Nova Hedwigia 110 (2020) 395-405. dx.doi.org/10.1127/nova_hedwigia/2020/0582
Oliveira L, Neumann P, Jang T-S, Klemme S, Schubert V, Koblížková A, Houben A, Macas J Mitotic spindle attachment to the holocentric chromosomes of Cuscuta europaea does not correlate with the distribution of CENH3 chromatin. Front. Plant Sci. 10 (2020) 1799. dx.doi.org/10.3389/fpls.2019.01799
Palfalvi G, Hackl T, Terhoeven N, Shibata T F, Nishiyama T, Ankenbrand M, Becker D, Förster F, Freund M, Iosip A, Kreuzer I, Saul F, Kamida C, Fukushima K, Shigenobu S, Tamada Y, Adamec L, Hoshi Y, Ueda K, Winkelmann T, Fuchs J, Schubert I, Schwacke R, Al-Rasheid K, Schultz J, Hasebe M, Hedrich R Genomes of the Venus flytrap and close relatives unveil the roots of plant carnivory. Curr. Biol. 30 (2020) 2312-2320. dx.doi.org/10.1016/j.cub.2020.04.051
Potlapalli B P Development of RGEN-ISL, a CRISPR/Cas9 based genome labeling tool for metaphase chromosomes of plants and mammalian cells. (Master Thesis) Stuttgart, Universität Hohenheim (2020) 61 pp.
Potlapalli B P, Schubert V, Metje-Sprink J, Liehr T, Houben A Application of Tris-HCl allows the specific labeling of regularly prepared chromosomes by CRISPR-FISH. Cytogenet. Genome Res. 160 (2020) 156-165. dx.doi.org/10.1159/000506720
Ruban A, Schmutzer T, Wu D D, Fuchs J, Boudichevskaia A, Rubtsova M, Pistrick K, Melzer M, Himmelbach A, Schubert V, Scholz U, Houben A Supernumerary B chromosomes of Aegilops speltoides undergo precise elimination in roots early in embryo development. Nat. Commun. 11 (2020) 2764. dx.doi.org/10.1038/s41467-020-16594-x
Schmidt C, Fransz P, Rönspies M, Dreissig S, Fuchs J, Heckmann S, Houben A, Puchta H Changing local recombination patterns in plants by CRISPR/Cas mediated chromosome engineering. Nat. Commun. 11 (2020) 4418. dx.doi.org/10.1038/s41467-020-18277-z
Schubert V, Neumann P, Marques A, Heckmann S, Macas J, Pedrosa-Harand A, Schubert I, Jang T-S, Houben A Super-resolution microscopy reveals diversity of plant centromere architecture. Int. J. Mol. Sci. 21 (2020) 3488. dx.doi.org/10.3390/ijms21103488
Sousa A, Schubert V, Renner S S Centromere organization and UU/V sex chromosome behavior in a liverwort. Plant J. (2020) Epub ahead of print. dx.doi.org/10.1111/tpj.15150
Swentowsky K W, Gent J I, Lowry E G, Schubert V, Ran X, Tseng K-F, Harkess A E, Qiu W, Dawe R K Distinct kinesin motors drive two types of maize neocentromeres. Genes Dev. 34 (2020) 1239-1251. dx.doi.org/10.1101/gad.340679.120
Tikhenko N, Alqudah A M, Borisjuk L, Ortleb S, Rutten T, Wu D D, Nagel M, Himmelbach A, Mascher M, Röder M, Ganal M, Sehmisch S, Houben A, Börner A DEFECTIVE ENDOSPERM-D1 (Dee-D1) is crucial for endosperm development in hexaploid wheat. Commun. Biol. 3 (2020) 791. doi.org/10.1038/s42003-020-01509-9
Wu D D, Ruban A, Rutten T, Zhou Y H, Houben A Analysis of pollen grains by immunostaining and FISH in Triticeae species. In: Pradillo M, Heckmann S (Eds.): Plant Meiosis: methods and protocols. (Series: Methods in molecular biology, Vol. 2061) New York, NY: Humana Press (2020) 347-358. dx.doi.org/10.1007/978-1-4939-9818-0_24 978-1-4939-9817-3
2019
Bachmann-Pfabe S, Roschanski A, Willner E, Boller B, Fuchs J, Dehmer K J New collections of Lolium and Festuca spp. can improve yield stability and stress tolerance in grass cultivars. In: Huguenin-Elie O, Studer B, Kölliker R, Reheul D, Probo M (Eds.): Improving sown grasslands through breeding and management: Proceedings of the Joint 20th Symposium of the European Grassland Federation and the 33rd Meeting of the EUCARPIA Section Fodder Crops and Amenity Grasses", Zürich, Switzerland, 24-27 June 2019." (Series: Grassland science in Europe, Vol. 24) Wageningen, The Netherlands: Wageningen Academic Publishers (2019) 364-366. ISBN 978-3-033-07278-7
Bačovský V, Houben A, Kumke K, Hobza R The distribution of epigenetic histone marks differs between the X and Y chromosomes in Silene latifolia. Planta 250 (2019) 487-494. dx.doi.org/10.1007/s00425-019-03182-7
Báez M, Vaio M, Dreissig S, Schubert V, Houben A, Pedrosa-Harand A Together but different: the subgenomes of the bimodal Eleutherine karyotypes are differentially organized. Front. Plant Sci. 10 (2019) 1170. dx.doi.org/10.3389/fpls.2019.01170
Boruc J, Deng X G, Mylle E, Besbrugge N, Van Durme M, Demidov D, Tomastikova E D, Tan T C, Vandorpe M, Eeckhout D, Beeckman T, Nowack M K, De Jaeger G, Lin H, Liu B, van Damme D TPX2-LIKE PROTEIN 3 is the primary activator of alpha Aurora kinases and is essential for embryogenesis. Plant Physiol. 180 (2019) 1389-1405. dx.doi.org/10.1104/pp.18.01515
Boudichevskaia A, Houben A, Fiebig A, Prochazkova K, Pecinka A, Lermontova I Depletion of KNL2 results in altered expression of genes involved in regulation of the cell cycle, transcription, and development in Arabidopsis. Int. J. Mol. Sci. 20 (2019) 5726. dx.doi.org/10.3390/ijms20225726
Demidov D, Heckmann S, Weiss O, Rutten T, Tomaštíková E D, Kuhlmann M, Scholl P, Municio C M, Lermontova I, Houben A Deregulated phosphorylation of CENH3 at Ser65 affects the development of floral meristems in Arabidopsis thaliana. Front. Plant Sci. 10 (2019) 928. dx.doi.org/10.3389/Fpls.2019.00928
Ebrahimzadegan R, Houben A, Mirzaghaderi G Repetitive DNA landscape in essential A and supernumerary B chromosomes of Festuca pratensis Huds. Sci. Rep. 9 (2019) 19989. dx.doi.org/10.1038/s41598-019-56383-1
Garavello M, Cuenca J, Dreissig S, Fuchs J, Houben A, Aleza P Assessing ploidy levels and single pollen genotyping of diploid and euploid citrus genotypes by fluorescence-activated cell sorting and whole genome amplification. Front. Plant Sci. 10 (2019) 1174. dx.doi.org/10.3389/fpls.2019.01174
Hesse S, Zelkowski M, Mikhailova E I, Keijzer C J, Houben A, Schubert V Ultrastructure and dynamics of synaptonemal complex components during meiotic pairing and synapsis of standard (A) and accessory (B) rye chromosomes. Front. Plant Sci. 10 (2019) 773. dx.doi.org/10.3389/fpls.2019.00773
Hoang P T N, Schubert V, Meister A, Fuchs J, Schubert I Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds. Sci. Rep. 9 (2019) 3234. dx.doi.org/10.1038/s41598-019-39332-w
Houben A, Jones N, Martins C, Trifonov V Evolution, composition and regulation of supernumerary B chromosomes. Genes 10 (2019) 161. dx.doi.org/10.3390/genes10020161
Houben A, Schubert I Bericht zur Internationalen Konferenz Plant genome stability and change" (03.-06-06.2018 in Gatersleben)." Leopoldina-Jahrbuch 2018 (2019) 311-314.
Ishii T, Schubert V, Khosravi S, Dreissig S, Metje-Sprink J, Sprink T, Fuchs J, Meister A, Houben A RNA-guided endonuclease – in situ labelling (RGEN-ISL): a fast CRISPR/Cas9-based method to label genomic sequences in various species. New Phytol. 222 (2019) 1652-1661. dx.doi.org/10.1111/nph.15720
Jones N, Ruban A Are B chromosomes useful for crop improvement? Plants, People, Planet 1 (2019) 84-92. dx.doi.org/10.1002/ppp3.16
Kalinowska K, Chamas S, Unkel K, Demidov D, Lermontova I, Dresselhaus T, Kumlehn J, Dunemann F, Houben A State-of-the-art and novel developments of in vivo haploid technologies. Theor. Appl. Genet. 132 (2019) 593–605. dx.doi.org/10.1007/s00122-018-3261-9
Kapoor H Analysis of B chromosome drive. (Master Thesis) Göttingen, Georg-August-Universität Göttingen, Fakultät für Agrarwissenschaften (2019) 54 pp.
Lin F, Krishnamoorthy P, Schubert V, Hause G, Heilmann M, Heilmann I A dual role for cell plate‐associated PI4Kβ in endocytosis and phragmoplast dynamics during plant somatic cytokinesis. EMBO J. 38 (2019) e100303. dx.doi.org/10.15252/embj.2018100303
Municio Diaz C M Characterization of CAP-D2 and CAP-D3 condensin subunits in Arabidopsis thaliana. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III Agrar- und Ernährungswissenschaften, Geowissenschaften und Informatik (2019) 104 pp.
Mursalimov S, Deineko E, Houben A, Demidov D Histone modifications during tobacco male meiosis. Biol. Plant. 63 (2019) 681-689. dx.doi.org/10.32615/bp.2019.077
Němečková A, Wäsch C, Schubert V, Ishii T, Hřibová E, Houben A CRISPR/Cas9-based RGEN-ISL allows the simultaneous and specific visualization of proteins, DNA repeats and sites of DNA replication. Cytogenet. Genome Res. 159 (2019) 48-53. dx.doi.org/10.1159/000502600
Ruban A Analysis of the B chromosomes undergoing root-specific elimination during the embryogenesis of Aegilops speltoides. (PhD Thesis, kumulativ) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III Agrar- und Ernährungswissenschaften, Geowissenschaften und Informatik (2019) 179 pp.
Schmidt T, Heitkam T, Liedtke S, Schubert V, Menzel G Adding color to a century-old enigma: multi-color chromosome identification unravels the autotriploid nature of saffron (Crocus sativus) as a hybrid of wild Crocus cartwrightianus cytotypes. New Phytol. 222 (2019) 1965-1980. dx.doi.org/10.1111/nph.15715
Schnittler M, Horn K, Kaufmann R, Rimgailė-Voicik R, Klahr A, Bog M, Fuchs J, Bennert H W Genetic diversity and hybrid formation in Central European club-mosses (Diphasiastrum, Lycopodiaceae) – new insights from cp microsatellites, two nuclear markers and AFLP. Mol. Phylogenet. Evol. 131 (2019) 181-192. doi.org/10.1016/j.ympev.2018.11.001
Traut W, Schubert V, Daliková M, Marec F, Sahara K Activity and inactivity of moth sex chromosomes in somatic and meiotic cells. Chromosoma 128 (2019) 533-545. dx.doi.org/10.1007/s00412-019-00722-8
Wu D, Ruban A, Fuchs J, Macas J, Novak P, Vaio M, Zhou Y, Houben A Nondisjunction and unequal spindle organization accompany the drive of Aegilops speltoides B chromosomes. New Phytol. 223 (2019) 1340-1352. dx.doi.org/10.1111/nph.15875
Zelkowski M Arabidopsis NSE4 proteins act in somatic nuclei and meiosis to ensure plant viability and fertility. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III Agrar- und Ernährungswissenschaften, Geowissenschaften und Informatik (2019) 130 pp.
Zelkowski M, Zelkowska K, Conrad U, Hesse S, Lermontova I, Marzec M, Meister A, Houben A, Schubert V Arabidopsis NSE4 proteins act in somatic nuclei and meiosis to ensure plant viability and fertility. Front. Plant Sci. 10 (2019) 774. dx.doi.org/10.3389/fpls.2019.00774
2018
Badaeva E D, Ruban A S, Shishkina A A, Sibikeev S N, Druzhin A E, Surzhikov S A, Dragovich A Y Genetic classification of Aegilops columnaris Zhuk. (2n=4x=28, UcUcXcXc) chromosomes based on FISH analysis and substitution patterns in common wheat x Ae. columnaris introgressive lines. Genome 61 (2018) 131-143. dx.doi.org/10.1139/gen-2017-0186
Baroux C, Schubert V Technical Review: Microscopy and image processing tools to analyse plant chromatin – practical considerations. In: Bemer M, Baroux C (Eds.): Plant Chromatin Dynamics: Methods and Protocols. (Series: Methods in molecular biology, Vol. 1675) New York, NY: Humana Press (2018) 537-589. dx.doi.org/10.1007/978-1-4939-7318-7_31 ISBN 978-1-4939-7317-0
Chen E C, Mathieu S, Hoffrichter A, Sedzielewska-Toro K, Peart M, Pelin A, Ndikumana S, Ropars J, Dreissig S, Fuchs J, Brachmann A, Corradi N Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi. eLife 7 (2018) e39813. dx.doi.org/10.7554/eLife.39813
Dreissig S Development of single-cell analysis methodologies to investigate segregation and dynamics of defined genomic regions during meiosis and interphase. (PhD Thesis, kumulativ) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III Agrar- und Ernährungswissenschaften, Geowissenschaften und Informatik (2018) 88 pp.
Dvořáčková M, Raposo B, Matula P, Fuchs J, Schubert V, Peška V, Desvoyes B, Gutierrez C, Fajkus J Replication of ribosomal DNA in Arabidopsis occurs both inside and outside of the nucleolus during S-phase progression. J. Cell Sci. 131 (2018) jcs202416. dx.doi.org/10.1242/jcs.202416
Gorafi Y S A, Ishii T, Kim J-S, Elbashir A A E, Tsujimoto H Genetic variation and association mapping of grain iron and zinc contents in synthetic hexaploid wheat germplasm. Plant Genet. Resour. 16 (2018) 9-17. dx.doi.org/10.1017/S1479262116000265
Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species. Plant J. 96 (2018) 1309-1316. dx.doi.org/10.1111/tpj.14109
Houben A, Aliyeva-Schnorr L, Joshi G P, Endo T R Cytogenetics and genetic stocks for physical mapping and sequencing. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 25-44. dx.doi.org/10.1007/978-3-319-92528-8_3 ISBN 978-3-319-92528-8
Houben A, Jones N, Martins C, Trifonov V (Eds.) Genes, Special Issue “Evolution, composition and regulation of supernumerary B chromosomes, Vol. 9 " (2018) pp.
Lang D, Ullrich K K, Murat F, Fuchs J, Jenkins J, Haas F B, Piednoel M, Gundlach H, Van Bel M, Meyberg R, Vives C, Morata J, Symeonidi A, Hiss M, Muchero W, Kamisugi Y, Saleh O, Blanc G, Decker E L, van Gessel N, Grimwood J, Hayes R D, Graham S W, Gunter L E, McDaniel S, Hoernstein S N W, Larsson A, Li F-W, Perroud P-F, Phillips J, Ranjan P, Rokshar D S, Rothfels C J, Schneider L, Shu S, Stevenson D W, Thümmler F, Tillich M, Villarreal A J C, Widiez T, Wong G K-S, Wymore A, Zhang Y, Zimmer A D, Quatrano R S, Mayer K F X, Goodstein D, Casacuberta J M, Vandepoele K, Reski R, Cuming A C, Tuskan J, Maumus F, Salse J, Schmutz J, Rensing S A The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution. Plant J. 93 (2018) 515-533. dx.doi.org/10.1111/tpj.13801
Marques A, Klemme S, Houben A Evolution of plant B chromosome enriched sequences. (Correction: Genes 2019, 10, 85, doi:10.3390/genes10020085). Genes 9 (2018) 515. dx.doi.org/10.3390/genes9100515
Martinez-Garcia M, Schubert V, Osman K, Darbyshire A, Sanchez-Moran E, Franklin F C H TOPII and chromosome movement help remove interlocks between entangled chromosomes during meiosis. J. Cell Biol. 217 (2018) 4070-4079. doi.org/10.1083/jcb.201803019
Radchuk V, Tran V, Radchuk R, Diaz-Mendoza M, Weier D, Fuchs J, Riewe D, Hensel G, Kumlehn J, Munz E, Heinzel N, Rolletschek H, Martinez M, Borisjuk L Vacuolar processing enzyme 4 contributes to maternal control of grain size in barley by executing programmed cell death in the pericarp. New Phytol. 218 (2018) 1127-1142. dx.doi.org/10.1111/nph.14729
Ruban A S, Badaeva E D Evolution of the S-genomes in Triticum-Aegilops alliance: evidences from chromosome analysis. Front. Plant Sci. 9 (2018) 1756. dx.doi.org/10.3389/Fpls.2018.01756
Tiedemann S Tradescantia virginiana – a species suitable for CRISPR/Cas9-based in situ imaging of specific genomic sequences? (Bachelor Thesis) Regensburg, Universität Regensburg, Fakultät für Biologie und Vorklinische Medizin, Lehrstuhl für Zellbiologie und Pflanzenbiochemie (2018) 43 pp.
Zuljan E Optimisation of kinetochore proteins-based mechanisms of haploid induction in Arabidopsis. (Bachelor Thesis) Berlin, Freie Universität Berlin, Fachbereich Biologie, Chemie, Pharmazie (2018) 47 pp.
2017
Antosz W, Pfab A, Ehrnsberger H F, Holzinger P, Köllen K, Mortensen S A, Bruckmann A, Schubert T, Längst G, Griesenbeck J, Schubert V, Grasser M, Grasser K D The composition of the Arabidopsis RNA polymerase II transcript elongation complex reveals the interplay between elongation and mRNA processing factors. Plant Cell 29 (2017) 854-870. dx.doi.org/10.1105/tpc.16.00735
Badaeva E D, Ruban A S, Aliyeva-Schnorr L, Municio C, Hesse S, Houben A In situ hybridisation to plant chromosomes. In: Liehr T (Ed.): Fluorescence In Situ Hybridization (FISH): Application Guide. Berlin, Heidelberg: Springer Protocols Handbooks, Springer (2017) 477-494. dx.doi.org/10.1007/978-3-662-52959-1_49 978-3-662-52959-1
Baroux C, Pecinka A, Fuchs J, Kreth G, Schubert I, Grossniklaus U Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma 126 (2017) 115-124. dx.doi.org/10.1007/s00412-016-0578-5
Batzenschlager M, Schmit A-C, Herzog E, Fuchs J, Schubert V, Houlné G, Chabouté M-E MGO3 and GIP1 act synergistically for the maintenance of centromeric cohesion. Nucleus 8 (2017) 98-105. dx.doi.org/10.1080/19491034.2016.1276142
Beier S, Himmelbach A, Colmsee C, Zhang X-Q, Barrero R A, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer G J, Kersey P, Clark M D, Caccamo M, Schulman A H, Platzer M, Close T J, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Sci. Data 4 (2017) 170044. dx.doi.org/10.1038/sdata.2017.44
Bustamante F O, Aliyeva-Schnorr L, Fuchs J, Beier S, Houben A Correlating the genetic and physical map of barley chromosome 3H revealed limitations of the FISH-based mapping of nearby single-copy probes caused by the dynamic structure of metaphase chromosomes. Cytogenet. Genome Res. 152 (2017) 90-96. dx.doi.org/10.1159/000478631
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Sequencing of single pollen nuclei reveals meiotic recombination events at megabase resolution and circumvents segregation distortion caused by postmeiotic processes. Front. Plant Sci. 8 (2017) 1620. dx.doi.org/10.3389/fpls.2017.01620
Dreissig S, Rutten T, Schubert V, Houben A Nicotiana benthamiana. (Calendar page). In: Inaga S, Nakata M, Taniguchi K (Eds.): Chromosome Calendar 2018. Japan: The Society of Chromosome Research (2017) 1.
Dreissig S, Schiml S, Schindele P, Weiss O, Rutten T, Schubert V, Gladilin E, Mette M F, Puchta H, Houben A Live cell CRISPR-imaging in plants reveals dynamic telomere movements. (The Plant Journal - 2017 Best Paper Award: Gold Prize in the category 'Technical Advance Article'). Plant J. 91 (2017) 565-573. dx.doi.org/10.1111/tpj.13601
Evtushenko E V, Elisafenko E A, Gatzkaya S S, Lipikhina Y A, Houben A, Vershinin A V Conserved molecular structure of the centromeric histone CENH3 in Secale and its phylogenetic relationships. Sci. Rep. 7 (2017) 17628. dx.doi.org/10.1038/s41598-017-17932-8
Gutsche N, Holtmannspötter M, Maß L, O'Donoghue M, Busch A, Lauri A, Schubert V, Zachgo S Conserved redox-dependent DNA binding of ROXY glutaredoxins with TGA transcription factors. Plant Direct 1 (2017) e00030. dx.doi.org/10.1002/pld3.30
Hesse S, Zelkowski M, Ishii T, Houben A, Schubert V Secale cereale. (Calendar page). In: Inaga S, Nakata M, Taniguchi K (Eds.): Chromosome Calendar 2018. Japan: The Society of Chromosome Research (2017) 1.
Houben A B chromosomes – a matter of chromosome drive. Front. Plant Sci. 8 (2017) 210. dx.doi.org/10.3389/fpls.2017.00210
Ishii T Wide hybridization between oat and pearl millet. In: Gasparis S (Ed.): Oat: methods and protocols. (Series: Methods in molecular biology, Vol. 1536) New York [u.a.]: Humana Press (2017) 31-42. dx.doi.org/10.1007/978-1-4939-6682-0_3 ISBN 978-1-4939-6680-6
Ishii T, Okamoto T, Tonosaki K, Nagaki K, Kinoshita T Research on post-fertilization barriers in the context of plant breeding. Breed. Res. 19 (2017) 35-40. dx.doi.org/10.1270/jsbbr.19.35
Kappermann J Beeinflussung der Anzahl und Verteilung meiotischer Rekombinationsereignisse in der Gerste (Hordeum vulgare) mittels Manipulation epigenetischer Faktoren anhand von Chemikalien. (Bachelor Thesis) Köthen, Hochschule Anhalt (2017)
Lermontova I Generation of haploid plants based on KNL 2. (IPK-Anmeldung), Veröffentlichung: 27.04.2017, IPK-Nr. 2015/01. WO2017/067714 (2017).
Ma W Analysis of two exceptional chromosome-types in plants. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Institut für Agrar- und Ernährungswissenschaften der Naturwissenschaftlichen Fakultät III (2017) 93 pp.
Ma W, Gabriel T S, Martis M M, Gursinsky T, Schubert V, Vrana J, Dolezel J, Grundlach H, Altschmied L, Scholz U, Himmelbach A, Behrens S E, Banaei-Moghaddam A M, Houben A Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog. New Phytol. 213 (2017) 916-928. dx.doi.org/10.1111/nph.14110
Maheshwari S, Ishii T, Brown C T, Houben A, Comai L Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence. Genome Res. 27 (2017) 471-478. dx.doi.org/10.1101/gr.214619.116
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok S O, Wicker T, Radchuk V, Dockter C, Hedley P E, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang X-Q, Zhang Q, Barrero R A, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer G J, Clark M D, Caccamo M, Schulman A H, Mayer K F X, Platzer M, Close T J, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N A chromosome conformation capture ordered sequence of the barley genome. Nature 544 (2017) 427-433. dx.doi.org/10.1038/nature22043
Messmer G Charakterisierung der Condensine in Arabidopsis thaliana und Nicotiana benthamiana. (Bachelor Thesis) Regensburg, Universität Regensburg, Fakultät für Biologie und Vorklinische Medizin, Lehrstuhl für Zellbiologie und Pflanzenbiochemie (2017) 58 pp.
Pandey P, Daghma D S, Houben A, Kumlehn J, Melzer M, Rutten T Dynamics of post-translationally modified histones during barley pollen embryogenesis in the presence or absence of the epi-drug trichostatin A. Plant Reprod. 30 (2017) 95-105. dx.doi.org/10.1007/s00497-017-0302-5
Ptoskova K Regulation of Aurora kinase 1 by members of TPX2 family in Arabidopsis thaliana. (Master Thesis) Olomouc, Czech Republic, Palacký University Olomouc, Faculty of Science Departament of Cell Biology and Genetics (2017) 68 pp.
Ribeiro T, Marques A, Novák P, Schubert V, Vanzela A L L, Macas J, Houben A, Pedrosa-Harand A Centromeric and non-centromeric satellite DNA organisation differs in holocentric Rhynchospora species. Chromosoma 126 (2017) 325-335. dx.doi.org/10.1007/s00412-016-0616-3
Rocha L C, Jankowska M, Fuchs J, Mittelmann A, Techio V H, Houben A Decondensation of chromosomal 45S rDNA sites in Lolium and Festuca genotypes does not result in karyotype instability. Protoplasma 254 (2017) 285-292. dx.doi.org/10.1007/s00709-016-0942-6
Ruban A, Schmutzer T, Scholz U, Houben A How next-generation sequencing has aided our understanding of the sequence composition and origin of B chromosomes. Genes 8 (2017) 294. dx.doi.org/10.3390/genes8110294
Sandmann M, Lermontova I Kinetochors and centromeres, the structural basis for reproduction. Endocytobiosis Cell Res. 28 (2017) 38-49.
Sandmann M, Talbert P, Demidov D, Kuhlmann M, Rutten T, Conrad U, Lermontova I Targeting of A. thaliana KNL2 to centromeres depends on the conserved CENPC-k motif in its C-terminus. Plant Cell 29 (2017) 144-155. dx.doi.org/10.1105/tpc.16.00720
Schubert L F, Krüger S, Moritz G B, Schubert V Male reproductive system and spermatogenesis of Limodromus assimilis (Paykull 1790). PLoS One 12 (2017) e0180492. dx.doi.org/10.1371/journal.pone.0180492
Schubert V Super-resolution microscopy – applications in plant cell research. Front. Plant Sci. 8 (2017) 531. dx.doi.org/10.3389/fpls.2017.00531
Sousa A, Fuchs J, Renner S S Cytogenetic comparison of heteromorphic and homomorphic sex chromosomes in Coccinia (Cucurbitaceae) points to sex chromosome turnover. Chromosome Res. 25 (2017) 191–200. dx.doi.org/10.1007/s10577-017-9555-y
Tran T D, Šimková H, Schmidt R, Doležel J, Schubert I, Fuchs J Chromosome identification for the carnivorous plant Genlisea margaretae. Chromosoma 126 (2017) 389–397. dx.doi.org/10.1007/s00412-016-0599-0
Weichert H, Högy P, Mora-Ramirez I, Fuchs J, Eggert K, Koehler P, Weschke W, Fangmeier A, Weber H Grain yield and quality responses of wheat expressing a barley sucrose transporter to combined climate change factors. J. Exp. Bot. 68 (2017) 5511-5525. dx.doi.org/10.1093/jxb/erx366