Publikationen

Autoren Titel
2015
Aliyeva-Schnorr L, Beier S, Karafiátová M, Schmutzer T, Scholz U, Doležel J, Stein N, Houben A Cytogenetic mapping with centromeric BAC contigs shows that this recombination-poor region comprises more than half of barley chromosome 3H. Plant J. 84 (2015) 385–394. dx.doi.org/10.1111/tpj.13006
Aliyeva-Schnorr L, Ma L, Houben A A fast air-dry dropping chromosome preparation method suitable for FISH in plants. J. Vis. Exp. 106 (2015) e53470. dx.doi.org/10.3791/53470
Antosch M, Schubert V, Holzinger P, Houben A, Grasser K D Mitotic lifecycle of chromosomal 3xHMG-box proteins and the role of their N-terminal domain in the association with rDNA loci and proteolysis. New Phytol. 208 (2015) 1067–1077. dx.doi.org/10.1111/nph.13575
Badaeva E D, Amosova A V, Goncharov N P, Macas J, Ruban A S, Grechishnikova I V, Zoshchuk S A, Houben A A set of cytogenetic markers allows the precise identification of all A-genome chromosomes in diploid and polyploid wheat. Cytogenet. Genome Res. 146 (2015) 71-79. dx.doi.org/10.1159/000433458
Banaei-Moghaddam A M, Martis M M, Macas J, Gundlach H, Himmelbach A, Altschmied L, Mayer K F, Houben A Genes on B chromosomes: Old questions revisited with new tools. Biochim. Biophys. Acta 1849 (2015) 64-70. dx.doi.org/10.1016/j.bbagrm.2014.11.007
Batzenschlager M, Lermontova I, Schubert V, Fuchs J, Berr A, Koini M A, Houlné G, Herzog E, Rutten T, Alioua A, Fransz P, Schmit A-C, Chabouté M-E Arabidopsis MZT1 homologs GIP1 and GIP2 are essential for centromere architecture. Proc. Natl. Acad. Sci. U.S.A. 112 (2015) 8656–8660. dx.doi.org/10.1073/pnas.1506351112
Bog M, Lautenschlager U, Landrock M F, Landolt E, Fuchs J, Sree S K, Oberprieler C, Appenroth K-J Genetic characterization and barcoding of taxa in the genera Landoltia and Spirodela (Lemnaceae) by three plastidic markers and amplified fragment length polymorphism (AFLP). Hydrobiologia 749 (2015) 169-182. dx.doi.org/10.1007/s10750-014-2163-3
Dreissig S, Fuchs J, Capal P, Kettles N, Byrne E, Houben A Measuring meiotic crossovers via multi-locus genotyping of single pollen grains in barley. PLoS One 10 (2015) e0137677. dx.doi.org/10.1371/journal.pone.0137677
Grabowska-Joachimiak A, Kula A, Gernand-Kliefoth D, Joachimiak A J Karyotype structure and chromosome fragility in the grass Phleum echinatum Host. Protoplasma 252 (2015) 301-306. dx.doi.org/10.1007/s00709-014-0681-5
Hampel J Wirksamkeitsanalyse von Inhibitoren, welche post-translationale Modifizierungen des Histons H3 in Pflanzen beeinflussen. (Bachelor Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät I Biowissenschaften (2015) 62 pp.
Ishii T, Karimi-Ashtiyani R, Banaei-Moghaddam A M, Schubert V, Fuchs J, Houben A The differential loading of two barley CENH3 variants into distinct centromeric substructures is cell type- and development-specific. Chromosome Res. 23 (2015) 277-284. dx.doi.org/10.1007/s10577-015-9466-8
Jankowska M, Fuchs J, Klocke E, Fojtová M, Polanská P, Fajkus J, Schubert V, Houben A Holokinetic centromeres and efficient telomere healing enable rapid karyotype evolution. Chromosoma 124 (2015) 519-528. dx.doi.org/10.1007/s00412-015-0524-y
Karimi-Ashtiyani R, Ishii T, Niessen M, Stein N, Heckmann S, Gurushidze M, Banaei-Moghaddam A M, Fuchs J, Schubert V, Koch K, Weiss O, Demidov D, Schmidt K, Kumlehn J, Houben A Point mutation impairs centromeric CENH3 loading and induces haploid plants. Proc. Natl. Acad. Sci. U.S.A. 112 (2015) 11211-11216. dx.doi.org/10.1073/pnas.1504333112
Marques A, Ribeiro T, Neumann P, Macas J, Novák P, Schubert V, Pellino M, Fuchs J, Ma W, Kuhlmann M, Brandt R, Vanzela A L L, Beseda T, Šimková H, Pedrosa-Harand A, Houben A Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed amongst euchromatin. Proc. Natl. Acad. Sci. U.S.A. 112 (2015) 13633–13638. dx.doi.org/10.1073/pnas.1512255112
Mette M F, Houben A Engineering of plant chromosomes. Chromosome Res. 23 (2015) 69-76. dx.doi.org/10.1007/s10577-014-9449-1
Mursalimov S, Permyakova N, Deineko E, Houben A, Demidov D Cytomixis doesn’t induce obvious changes in chromatin modifications and programmed cell death in tobacco male meiocytes. Front. Plant Sci. 6 (2015) 846. dx.doi.org/10.3389/fpls.2015.00846
Schmid M, Guttenbach M, Steinlein C, Wanner G, Houben A Cytogenetic characterization of the TM4 mouse sertoli cell line. II. Chromosome microdissection, FISH, scanning electron microscopy and confocal laser scanning microscopy. Cytogenet. Genome Res. 147 (2015) 135-143. dx.doi.org/10.1159/000444157
Schubert V, Weisshart K Abundance and distribution of RNA polymerase II in Arabidopsis interphase nuclei. J. Exp. Bot. 66 (2015) 1687-1698. dx.doi.org/10.1093/jxb/erv091
Tomaštíková E, Demidov D, Jeřábková H, Binarová P, Houben A, Doležel J, Petrovská B TPX2 protein of Arabidopsis activates Aurora kinase 1, but not Aurora kinase 3 in vitro. Plant Mol. Biol. Rep. 33 (2015) 1988-1995. dx.doi.org/10.1007/s11105-015-0890-x
Tran D T, Cao H X, Jovtchev G, Novák P, Vu G T H, Macas J, Schubert I, Fuchs J Chromatin organization and cytological features of carnivorous Genlisea species with large genome size differences. Front. Plant Sci. 6 (2015) 613. dx.doi.org/10.3389/fpls.2015.00613
Tran T D, Cao H X, Jovtchev G, Neumann P, Novak P, Fojtova M, Vu G T, Macas J, Fajkus J, Schubert I, Fuchs J Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea. Plant J. 84 (2015) 1087-1099. dx.doi.org/10.1111/tpj.13058
Vu G T H, Schmutzer T, Bull F, Cao H X, Fuchs J, Tran D T, Jovtchev G, Pistrick K, Stein N, Pecinka A, Neumann P, Novák P, Macas J, Dear P H, Blattner F R, Scholz U, Schubert I Comparative genome analysis reveals divergent genome size evolution in a carnivorous plant genus. Plant Genome 8 (2015) 1-14. dx.doi.org/10.3835/plantgenome2015.04.0021
Wanner G, Schroeder-Reiter E, Ma W, Houben A, Schubert V The ultrastructure of mono- and holocentric plant centromeres: an immunological investigation by structured illumination microscopy and scanning electron microscopy. Chromosoma 124 (2015) 503-517. dx.doi.org/10.1007/s00412-015-0521-1
2014
Cabral G, Marques A, Schubert V, Pedrosa-Harand A, Schlögelhofer P Chiasmatic and achiasmatic inverted meiosis of plants with holocentric chromosomes. Nat. Commun. 5 (2014) 5070. dx.doi.org/10.1038/ncomms6070
Demidov D, Lermontova I, Weiss O, Fuchs J, Rutten T, Kumke K, Sharbel T F, van Damme D, de Storme N, Geelen D, Houben A Altered expression of Aurora kinases in Arabidopsis results in aneu- and polyploidization. Plant J. 80 (2014) 449-461. dx.doi.org/10.1111/tpj.12647
Demidov D, Schubert V, Kumke K, Weiss O, Karimi-Ashtiyani R, Butlar J, Heckmann S, Wanner G, Dong Q, Han F, Houben A Anti-phosphorylated histone H2AThr120: a universal marker for centromeric chromatin of mono- and holocentric plant species. Cytogenet. Genome Res. 143 (2014) 150-156. dx.doi.org/10.1159/000360018
Dunemann F, Schrader O, Budahn H, Houben A Characterization of centromeric histone H3 (CENH3) variants in cultivated and wild carrots (Daucus sp.). PLoS One 9 (2014) e98504. dx.doi.org/10.1371/journal.pone.0098504
Dürr J, Lolas I B, Sorensen B B, Schubert V, Houben A, Melzer M, Deutzmann R, Grasser M, Grasser K D The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis. Nucleic Acids Res. 42 (2014) 4332-4347. dx.doi.org/10.1093/nar/gku096
Feng S, Cokus S J, Schubert V, Zhai J, Pellegrini M, Jacobsen S E Genome-wide Hi-C analyses in wild type and mutants reveal high-resolution chromatin interactions in Arabidopsis. Mol. Cell 55 (2014) 694-707. dx.doi.org/10.1016/j.molcel.2014.07.008
Heckmann S, Jankowska M, Schubert V, Kumke K, Ma W, Houben A Alternative meiotic chromatid segregation in the holocentric plant Luzula elegans. Nat. Commun. 5 (2014) 4979. dx.doi.org/10.1038/ncomms5979
Heckmann S, Schubert V, Houben A Holocentric plant meiosis: first sisters, then homologues. Cell Cycle 13 (2014) 3623-3624. dx.doi.org/10.4161/15384101.2014.986628
Houben A, Banaei-Moghaddam A M, Klemme S, Timmis J N Evolution and biology of supernumerary B chromosomes. Cell. Mol. Life Sci. 71 (2014) 467-478. dx.doi.org/10.1007/s00018-013-1437-7
Houben A, Naranjo T, Puertas M J (Eds.) Special Issue: Organization, dynamics and modification of chromatin in plants. (Series: Cytogenet. Genome Res., Vol. 143, No. 1-3) Basel: Karger (2014) 220 pp. ISBN 978-3-318-02725-9
Ishii T, Houben A How to eliminate a partner for good. Cell Cycle 13 (2014) 1-2. dx.doi.org/10.4161/cc.28752
Lermontova I, Sandmann M, Demidov D Centromeres and kinetochores of Brassicaceae. Chromosome Res. 22 (2014) 135-152. dx.doi.org/10.1007/s10577-014-9422-z
Mirzaghaderi G, Houben A, Badaeva E D Molecular-cytogenetic analysis of Aegilops triuncialis and identification of its chromosomes in the background of wheat. Mol. Cytogenet. 7 (2014) 91. dx.doi.org/10.1186/s13039-014-0091-6
Poursarebani N, Ma L, Schmutzer T, Houben A, Stein N FISH mapping for physical map improvement in the large genome of barley: a case study on chromosome 2H. Cytogenet. Genome Res. 143 (2014) 275-279. dx.doi.org/10.1159/000366028
Ruban A, Fuchs J, Marques A, Schubert V, Soloviev A, Raskina O, Badaeva E, Houben A B chromosomes of Aegilops speltoides are enriched in organelle genome-derived sequences. PLoS One 9 (2014) e90214. dx.doi.org/10.1371/journal.pone.0090214
Ruiz-Rodriguez M D, Avila C M, Torres A M, Fuchs J, Schubert I Anchoring of genetic linkage maps to the chromosome complement of Vicia faba L. Mol. Breed. 33 (2014) 743-748. dx.doi.org/10.1007/s11032-013-9969-y
Schmutzer T, Ma L, Pousarebani N, Bull F, Stein N, Houben A, Scholz U Kmasker – a tool for in silico prediction of single-copy FISH probes for the large-genome species Hordeum vulgare. Cytogenet. Genome Res. 142 (2014) 66-78. dx.doi.org/10.1159/000356460
Schubert V RNA polymerase II forms transcription networks in rye and Arabidopsis nuclei and its amount increases with endopolyploidy. Cytogenet. Genome Res. 143 (2014) 69-77. dx.doi.org/10.1159/000365233
Schubert V, Lermontova I, Schubert I Loading of the centromeric histone H3 variant during meiosis - how does it differ from mitosis? Chromosoma 123 (2014) 491-497. dx.doi.org/10.1007/s00412-014-0466-9
Schubert V, Rudnik R, Schubert I Chromatin associations in Arabidopsis interphase nuclei. Front. Genet. 5 (2014) 389. dx.doi.org/10.3389/fgene.2014.00389
Wang W, Haberer G, Gundlach H, Gläßer C, Nussbaumer T, Luo M C, Lomsadze A, Borodovsky M, Kerstetter R A, Shanklin J, Byrant D W, Mockler T C, Appenroth K J, Grimwood J, Jenkins J, Chow J, Choi C, Adam C, Cao X H, Fuchs J, Schubert I, Rokhsar D, Schmutz J, Michael T P, Mayer K F, Messing J X The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle. Nat. Commun. 5 (2014) 3311. dx.doi.org/10.1038/ncomms4311
Zakrzewski F, Schubert V, Viehoever P, Minoche A E, Dohm J C, Himmelbauer H, Weisshaar B, Schmidt T The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation. Plant J. 78 (2014) 937-950. dx.doi.org/10.1111/tpj.12519
2013
Acevedo-Garcia J, Collins N C, Ahmadinejad N, Ma L, Houben A, Bednarek P, Benjdia M, Freialdenhoven A, Altmüller J, Nürnberg P, Reinhardt R, Schulze-Lefert P, Panstruga R Fine mapping and chromosome walking towards the Ror1 locus in barley (Hordeum vulgare L.). Theor. Appl. Genet. 126 (2013) 2969-2982. dx.doi.org/10.1007/s00122-013-2186-6
Aliyu O M, Seifert M, Corral J M, Fuchs J, Sharbel T F Copy number variation in transcriptionally active regions of sexual and apomictic Boechera demonstrates independently-derived apomictic lineages. Plant Cell 25 (2013) 3808-3823. dx.doi.org/10.1105/tpc.113.113860
Banaei-Moghaddam A M, Meier K, Karimi-Ashtiyani R, Houben A Formation and expression of pseudogenes on the B chromosome of rye. Plant Cell 25 (2013) 2536-2544. dx.doi.org/10.1105/tpc.113.111856
Gohlke J, Scholz C J, Kneitz S, Weber D, Fuchs J, Hedrich R, Deeken R DNA methylation mediated control of gene expression is critical for development of crown gall tumors. PLoS Genet. 9 (2013) e1003267. dx.doi.org/10.1371/journal.pgen.1003267
Heckmann S Structure and regulation of centromeres in mono- and holocentric chromosomes. (PhD Thesis, kumulativ) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät I Biowissenschaften (2013) 53 pp.
Heckmann S, Houben A Holokinetic centromeres. In: Jiang J, Birchler J A (Eds.): Plant centromere biology, Vol. 1. Oxford [u.a.]: Wiley-Blackwell (2013) 83-94. dx.doi.org/10.1002/9781118525715.ch7 ISBN 978-1-119-94921-3
Heckmann S, Macas J, Kumke K, Fuchs J, Schubert V, Ma L, Novák P, Neumann P, Taudien S, Platzer M, Houben A The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization. Plant J. 73 (2013) 555-565. dx.doi.org/10.1111/tpj.12054
Houben A, Banaei Moghaddam A M, Klemme S Biology and evolution of B chromosomes. In: Greilhuber J, Dolezel J, Wendel J F (Eds.): Plant genome diversity, Vol. 2, Physical structure, behaviour and evolution of plant genomes. Wien [u.a.]: Springer (2013) 149-165. dx.doi.org/10.1007/978-3-7091-1160-4_10 ISBN 978-3-7091-1159-8
Houben A, Demidov D, Karimi-Ashtiyani R Epigenetic control of cell division. In: Grafi G, Ohad N (Eds.): Epigenetic memory and control in plants. (Series: Signaling and communication in plants, Vol. 18) Berlin [u.a.]: Springer (2013) 155-175. dx.doi.org/10.1007/978-3-642-35227-0_8 ISBN 978-3-642-35226-3
Houben A, Mette M F, Teo C H, Lermontova I, Schubert I Engineered plant minichromosomes. Int. J. Dev. Biol. 57 (2013) 651-657. dx.doi.org/10.1387/ijdb.130144ah
Karafiátová M, Bartoš J, Kopecký D, Ma L, Sato K, Houben A, Stein N, Doležel J Mapping nonrecombining regions in barley using multicolor FISH. Chromosome Res. 21 (2013) 739-751. dx.doi.org/10.1007/s10577-013-9380-x
Karimi-Ashtiyani R, Houben A In vitro phosphorylation of histone H3 at threonine 3 by Arabidopsis Haspin is strongly influenced by post-translational modifications of adjacent amino acids. Mol. Plant 6 (2013) 574-576. dx.doi.org/10.1093/mp/sss149
Klemme S High copy sequences reveal the unique composition and evolution of the rye B chromosome. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät I Biowissenschaften (2013) 97 pp.
Klemme S, Banaei-Moghaddam A M, Macas J, Wicker T, Novak P, Houben A High-copy sequences reveal distinct evolution of the rye B chromosome. New Phytol. 199 (2013) 550-558. dx.doi.org/10.1111/nph.12289
Lermontova I, Kuhlmann M, Friedel S, Rutten T, Heckmann S, Sandmann M, Demidov D, Schubert V, Schubert I Arabidopsis KINETOCHORE NULL2 is an upstream component for cenH3 deposition at centromeres. Plant Cell 25 (2013) 3389-3404. dx.doi.org/10.1105/tpc.113.114736
Marques A, Banaei-Moghaddam A M, Klemme S, Blattner F R, Niwa K, Guerra M, Houben A B chromosomes of rye are highly conserved and accompanied the development of early agriculture. Ann. Bot. 112 (2013) 527-534. dx.doi.org/10.1093/aob/mct121
Mau M, Corral J M, Vogel H, Melzer M, Fuchs J, Kuhlmann M, de Storme N, Geelen D, Sharbel T F The conserved chimeric transcript UPGRADE2 is associated with unreduced pollen formation and is exclusively found in apomictic Boechera species. Plant Physiol. 163 (2013) 1640-1659. dx.doi.org/10.1104/pp.113.222448
Pandey P, Houben A, Kumlehn J, Melzer M, Rutten T Chromatin alterations during pollen development in Hordeum vulgare. Cytogenet. Genome Res. 141 (2013) 50-57. dx.doi.org/10.1159/000351211
Schubert V, Lermontova I, Schubert I The Arabidopsis CAP-D proteins are required for correct chromatin organisation, growth and fertility. Chromosoma 122 (2013) 517-533. dx.doi.org/10.1007/s00412-013-0424-y
Sousa A, Fuchs J, Renner S S Molecular cytogenetics (FISH, GISH) of Coccinia grandis, a ca. 3 myr-old species of Cucurbitaceae with the largest Y/autosome divergence in flowering plants. Cytogenet. Genome Res. 139 (2013) 107-118. dx.doi.org/10.1159/000345370
Teo C H, Lermontova I, Houben A, Mette M F, Schubert I De novo generation of plant centromeres at tandem repeats. Chromosoma 122 (2013) 233-241. dx.doi.org/10.1007/s00412-013-0406-0
2012
Agueci F, Rutten T, Demidov D, Houben A Arabidopsis AtNek2 kinase is essential and associates with microtubules. Plant Mol. Biol. Rep. 30 (2012) 339-348. dx.doi.org/10.1007/s11105-011-0342-1
Banaei-Moghaddam A M, Schubert V, Kumke K, Weiß O, Klemme S, Nagaki K, Macas J, González-Sánchez M, Heredia V, Gómez-Revilla D, González-García M, Vega J M, Puertas M J, Houben A Nondisjunction in favor of a chromosome: the mechanism of rye B chromosome drive during pollen mitosis. Plant Cell 24 (2012) 4124-4134. dx.doi.org/10.1105/tpc.112.105270
Houben A Chromosome microdissection and utilization of microisolated DNA. In: Bass H, Birchler J A (Eds.): Plant cytogenetics: genome structure and chromosome function. (Series: Plant genetics and genomics: crops and models, Vol. 4) New York, NY [u.a.]: Springer (2012) 257-270. dx.doi.org/10.1007/978-0-387-70869-0_10 ISBN 978-0-387-70868-3
Houben A, Carchilan M Plant B chromosomes – What makes them different ? In: Bass H, Birchler J A (Eds.): Plant cytogenetics: genome structure and chromosome function. (Series: Plant genetics and genomics: crops and models, Vol. 4) New York, NY [u.a.]: Springer (2012) 59-78. dx.doi.org/10.1007/978-0-387-70869-0_3 ISBN 978-0-387-70868-3
Kapusi E, Ma L, Teo C H, Hensel G, Himmelbach A, Schubert I, Mette M F, Kumlehn J, Houben A Telomere-mediated truncation of barley chromosomes. Chromosoma 121 (2012) 181-190. dx.doi.org/10.1007/s00412-011-0351-8
Marques A, Klemme S, Guerra M, Houben A Cytomolecular characterization of de novo formed rye B chromosome variants. Mol. Cytogenet. 5 (2012) 34. dx.doi.org/10.1186/1755-8166-5-34
Martis M M, Klemme S, Banaei Moghaddam A M, Blattner F R, Macas J, Schmutzer T, Scholz U, Gundlach H, Wicker T, Šimková H, Novák P, Neumann P, Kubaláková M, Bauer E, Haseneyer G, Fuchs J, Doležel J, Stein N, Mayer K F X, Houben A Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences. Proc. Natl. Acad. Sci. U.S.A. 109 (2012) 13343-13346. dx.doi.org/10.1073/pnas.1204237109
Scholl P Analyse der funktionellen Interaktion zwischen AtAurora-Kinasen und dem Centromer-spezifischen Histon CENH3. (Bachelor Thesis) Köthen, Hochschule Anhalt (FH), Fachbereich Angewandte Biowissenschaften und Prozesstechnik (2012) 76 pp.
Schroeder-Reiter E, Sanei M, Houben A, Wanner G Current SEM techniques for de- and re-construction of centromeres to determine 3D CENH3 distribution in barley mitotic chromosomes. J. Microsc. 246 (2012) 96-106. dx.doi.org/10.1111/j.1365-2818.2011.03592.x
2011
Arefian E, Kiani J, Soleimani M, Shariati S A, Aghaee-Bakhtiari S H, Atashi A, Gheisari Y, Ahmadbeigi N, Banaei-Moghaddam A M, Naderi M, Namvarasl N, Good L, Faridani O R Analysis of microRNA signatures using size-coded ligation-mediated PCR. Nucleic Acids Res. 39 (2011) e80. dx.doi.org/10.1093/nar/gkr214
Banaei Moghaddam A M, Roudier F, Seifert M, Berard C, Magniette M L, Karimi Ashtiyani R, Houben A, Colot V, Mette M F Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids. Plant J. 67 (2011) 691-700. dx.doi.org/10.1111/j.1365-313X.2011.04628.x
Bandopadhyay R, Rustgi S, Chaudhuri R K, Khurana P, Khurana J P, Tyagi A K, Balyan H S, Houben A, Gupta P K Use of methylation filtration and C(0)t fractionation for analysis of genome composition and comparative genomics in bread wheat. J. Genet. Genomics 38 (2011) 315-325. dx.doi.org/10.1016/j.jgg.2011.06.003
Heckmann S, Lermontova I, Berckmans B, De Veylder L, Bäumlein H, Schubert I The E2F transcription factor family regulates CENH3 expression in Arabidopsis thaliana. Plant J. 68 (2011) 646-656. dx.doi.org/10.1111/j.1365-313X.2011.04715.x
Heckmann S, Schroeder-Reiter E, Kumke K, Ma L, Nagaki K, Murata M, Wanner G, Houben A Holocentric chromosomes of Luzula elegans are characterized by a longitudinal centromere groove, chromosome bending, and a terminal nucleolus organizer region. Cytogenet. Genome Res. 134 (2011) 220-228. dx.doi.org/10.1159/000327713
Houben A, Kumke K, Nagaki K, Hause G CENH3 distribution and differential chromatin modifications during pollen development in rye (Secale cereale L.). Chromosome Res. 19 (2011) 471-480. dx.doi.org/10.1007/s10577-011-9207-6
Houben A, Nasuda S, Endo T R Plant B chromosomes. In: Birchler J A (Ed.): Plant chromosome engineering: methods and protocols. (Series: Methods in molecular biology, Vol. 701) Totowa, NJ: Humana Press (2011) 97-111. dx.doi.org/10.1007/978-1-61737-957-4_5 1940-6029 (Electronic)1064-3745 (Linking)
Houben A, Sanei M, Pickering R Barley doubled-haploid production by uniparental chromosome elimination. Plant Cell Tiss. Organ Cult. 104 (2011) 321-327. dx.doi.org/10.1007/s11240-010-9856-8
Karimi Ashtiyani R, Banaei Moghaddam A M, Schubert V, Rutten T, Fuchs J, Demidov D, Blattner F R, Houben A AtHaspin phosphorylates histone H3 at threonine 3 during mitosis and contributes to embryonic patterning in Arabidopsis. Plant J. 68 (2011) 443-454. dx.doi.org/10.1111/j.1365-313X.2011.04699.x
Marques A, Fuchs J, Ma L, Heckmann S, Guerra M, Houben A Characterization of eu- and heterochromatin of Citrus with a focus on the condensation behavior of 45S rDNA chromatin. Cytogenet. Genome Res. 134 (2011) 72-82. dx.doi.org/10.1159/000323971
Okada T, Ito K, Johnson S D, Oelkers K, Suzuki G, Houben A, Mukai Y, Koltunow A M Chromosomes carrying meiotic avoidance loci in three apomictic eudicot Hieracium subgenus Pilosella species share structural features with two monocot apomicts. Plant Physiol. 157 (2011) 1327-1341. dx.doi.org/10.1104/pp.111.181164
Pedersen D S, Coppens F, Ma L, Antosch M, Marktl B, Merkle T, Beemster G T, Houben A, Grasser K D The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes. New Phytol. 192 (2011) 577-589. dx.doi.org/10.1111/j.1469-8137.2011.03828.x
Sanei M Analysis of uniparental chromsome elimination in wide crosses. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg (2011) 134 pp.
Sanei M, Pickering R, Kumke K, Nasuda S, Houben A Loss of centromeric histone H3 (CENH3) from centromeres precedes uniparental chromosome elimination in interspecific barley hybrids. (This article has been selected and evaluated by Jiming Jiang, a Member of the Faculty of 1000 (F1000), which places this work in that library of the top 2% of published articles in biology and medicine). Proc. Natl. Acad. Sci. U. S. A. 108 (2011) E498-E505. dx.doi.org/10.1073/pnas.1103190108
Schubert V, Meister A, Tsujimoto H, Endo T R, Houben A Similar rye A and B chromosome organization in meristematic and differentiated interphase nuclei. Chromosome Res. 19 (2011) 645-655. dx.doi.org/10.1007/s10577-011-9224-5
Teo C H, Ma L, Kapusi E, Hensel G, Kumlehn J, Schubert I, Houben A, Mette M F Induction of telomere-mediated chromosomal truncation and stability of truncated chromosomes in Arabidopsis thaliana. Plant J. 68 (2011) 28-39. dx.doi.org/10.1111/j.1365-313X.2011.04662.x
van Damme D, de Rybel B, Gudesblat G, Demidov D, Grunewald W, de Smet I, Houben A, Beeckman T, Russinova E Arabidopsis alpha Aurora kinases function in formative cell division plane orientation. Plant Cell 23 (2011) 4013-4024. dx.doi.org/10.1105/tpc.111.089565
2010
Agueci F Characterization of NIMA-like kinases in Arabidopsis thaliana. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät III (2010) 129 pp.
Banaei Moghaddam A M Dynamics of chromatin modifications and other nuclear features in response to intraspecific hybridization in Arabidopsis thaliana. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät I (2010) 143 pp.
Banaei Moghaddam A M, Fuchs J, Czauderna T, Houben A, Mette M F Intraspecific hybrids of Arabidopsis thaliana revealed no gross alterations in endopolyploidy, DNA methylation, histone modifications and transcript levels. Theor. Appl. Genet. 120 (2010) 215-226. dx.doi.org/10.1007/s00122-009-1127-x
Houben A Funktion und Evolution pflanzlicher B-Chromosomen. (Habilitation Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg (2010) 57 pp.
Kaczmarczyk A, Houben A, Keller E R, Mette M F Influence of cryopreservation on the cytosine methylation state of potato genomic NDA. Cryo Lett. 31 (2010) 380-391.
Kotseruba V, Pistrick K, Blattner F R, Kumke K, Weiss O, Rutten T, Fuchs J, Endo T, Nasuda S, Ghukasyan A, Houben A The evolution of the hexaploid grass Zingeria kochii (Mez) Tzvel. (2n=12) was accompanied by complex hybridization and uniparental loss of ribosomal DNA. Mol. Phylogenet. Evol. 56 (2010) 146-155. dx.doi.org/10.1016/j.ympev.2010.01.003
Lolas I B, Himanen K, Grønlund J T, Lynggaard C, Houben A, Melzer M, Van Lijsebettens M, Grasser K D The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2. Plant J. 61 (2010) 686-697. dx.doi.org/10.1111/j.1365-313X.2009.04096.x
Ma L, Vu G T, Schubert V, Watanabe K, Stein N, Houben A, Schubert I Synteny between Brachypodium distachyon and Hordeum vulgare as revealed by FISH. Chromosome Res. 18 (2010) 841-850. dx.doi.org/10.1007/s10577-010-9166-3
Nelissen H, De Groeve S, Fleury D, Neyt P, Bruno L, Bitonti M B, Vandenbussche F, Van Der Straeten D, Yamaguchi T, Tsukaya H, Witters E, De Jaeger G, Houben A, Van Lijsebettens M Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation. Proc. Natl. Acad. Sci. U.S.A. 107 (2010) 1678-1683. dx.doi.org/10.1073/pnas.0913559107
Sanei M, Pickering R, Fuchs J, Banaei Moghaddam A M, Dziurlikowska A, Houben A Interspecific hybrids of Hordeum marinum ssp. marinum x H. bulbosum are mitotically stable and reveal no gross alterations in chromatin properties. Cytogenet. Genome Res. 129 (2010) 110-116. dx.doi.org/10.1159/000313641
2009
Carchilan M, Kumke K, Mikolajewski S, Houben A Rye B chromosomes are weakly transcribed and might alter the transcriptional activity of A chromosome sequences. Chromosoma 118 (2009) 607-616. dx.doi.org/10.1007/s00412-009-0222-8
Demidov D, Hesse S, Tewes A, Rutten T, Fuchs J, Ashtiyani R K, Lein S, Fischer A, Reuter G, Houben A Aurora1 phosphorylation activity on histone H3 and its cross-talk with other post-translational histone modifications in Arabidopsis. Plant J. 59 (2009) 221-230. dx.doi.org/10.1111/j.1365-313X.2009.03861.x
Dhar M K, Fuchs J, Houben A Distribution of eu- and heterochromatin in Plantago ovata. Cytogenet. Genome Res. 125 (2009) 235-240. dx.doi.org/10.1159/000230007
Fetch T, Johnston P A, Pickering R Chromosomal location and inheritance of stem rust resistance transferred from Hordeum bulbosum into cultivated barley (H. vulgare). Phytopathology 99 (2009) 339-343. dx.doi.org/10.1094/PHYTO-99-4-0339
Houben A Chromosome structure and function. Preface. Cytogenet. Genome Res. 124 (2009) 191-192. dx.doi.org/10.1159/000218124
Houben A (Ed.) Chromosome Structure and Function. Reprint of: Cytogenetic and Genome Research 2009, Vol. 124, No. 3-4. Basel [u.a.]: Karger (2009) 180 pp. ISBN 978-3-8055-9212-3
Houben A, Pickering R Applying cytogenetics and genomics to wide hybridisations in the genus Hordeum. In: Feuillet C, Muehlbauer G (Eds.): Genetics and genomics of the Triticeae, 1st ed. (Series: Plant genetics and genomics: crops and models, Vol. 7) New York, NY: Springer (2009) 137-162. dx.doi.org/10.1007/978-0-387-77489-3_5 ISBN 978-0-387-77488-6
Johnston P A, Timmerman-Vaughan G M, Farnden K J, Pickering R Marker development and characterisation of Hordeum bulbosum introgression lines: a resource for barley improvement. Theor. Appl. Genet. 118 (2009) 1429-1437. dx.doi.org/10.1007/s00122-009-0992-7
Karimi Ashtiyani R AtHaspin, a putative histone H3-specific kinase in Arabidopsis thaliana? (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Naturwissenschaftliche Fakultät I (2009) 113 pp.
Seifert M, Banaei A, Keilwagen J, Mette M F, Houben A, Roudier F, Colot V, Grosse I, Strickert M Array-based genome comparison of Arabidopsis ecotypes using hidden Markov Models. In: Encarnação P, Veloso A (Eds.): Proceedings of the International Conference on Bio-Inspired Systems and Signal Processing: Porto, Portugal, January 14 - 17, 2009 [Setúbal]: INSTICC Press (2009) 3-11. ISBN 978-989-8111-65-4
Weissenborn C Manipulation der Histon H3 Expression zur funktionellen Charakterisierung der H3 Phosphorylierung in Pflanzen. (Diploma Thesis) Jena, Fachhochschule Jena, Fachbereich Medizintechnik und Biotechnologie (2009) 67 pp.
Wicker T, Taudien S, Houben A, Keller B, Graner A, Platzer M, Stein N A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley. Plant J. 59 (2009) 712-722. dx.doi.org/10.1111/j.1365-313X.2009.03911.x
2008
Caperta A D, Rosa M, Delgado M, Karimi R, Demidov D, Viegas W, Houben A Distribution patterns of phosphorylated Thr 3 and Thr 32 of histone H3 in plant mitosis and meiosis. Cytogenet. Genome Res. 122 (2008) 73-79. dx.doi.org/10.1159/000151319
Carchilan M Transcriptional analysis of rye B chromosomes. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg (2008) 91 pp.
Cohen S, Houben A, Segal D Extrachromosomal circular DNA derived from tandemly repeated genomic sequences in plants. Plant J. 53 (2008) 1027-1034. dx.doi.org/10.1111/j.1365-313X.2007.03394.x
Hesse S Charakterisierung potentieller Interaktoren der pflanzlichen Aurora Kinase AtAurora 1. (Diploma Thesis) Kassel, Universität Kassel (2008) 65 pp.
Houben A, Dawe R K, Jiang J, Schubert I Engineered plant minichromosomes: a bottom-up success? Plant Cell 20 (2008) 8-10. dx.doi.org/10.1105/tpc.107.056622
Jones R N, Viegas W, Houben A A century of B chromosomes in plants: So what? Ann. Bot. 101 (2008) 767-775. dx.doi.org/10.1093/aob/mcm167
Kumke K, Jones R N, Houben A B chromosomes of Puschkinia libanotica are characterized by a reduced level of euchromatic histone H3 methylation marks. Cytogenet. Genome Res. 121 (2008) 266-270. dx.doi.org/10.1159/000138895
Lildballe D L, Pedersen D S, Kalamajka R, Emmersen J, Houben A, Grasser K D The expression level of the chromatin-associated HMGB1 protein influences growth, stress tolerance, and transcriptome in Arabidopsis. J. Mol. Biol. 384 (2008) 9-21. dx.doi.org/10.1016/j.jmb.2008.09.014
Tikhenko N, Rutten T, Voylokov A, Houben A Analysis of hybrid lethality in F-1 wheat-rye hybrid embryos. Euphytica 159 (2008) 367-375. dx.doi.org/10.1007/s10681-007-9528-x
2007
Carchilan M, Delgado M, Ribeiro T, Costa-Nunes P, Caperta A, Morais-Cecílio L, Jones R N, Viegas W, Houben A Transcriptionally active heterochromatin in rye B chromosomes. Plant Cell 19 (2007) 1738-1749. dx.doi.org/10.1105/tpc.106.046946
Gernand D, Golczyk H, Rutten T, Ilnicki T, Houben A, Joachimiak A J Tissue culture triggers chromosome alterations, amplification, and transposition of repeat sequences in Allium fistulosum. Genome 50 (2007) 435-442. dx.doi.org/10.1139/G07-023
Houben A, Demidov D, Caperta A D, Karimi R, Agueci F, Vlasenko L Phosphorylation of histone H3 in plants-A dynamic affair. Biochim. Biophys. Acta 1769 (2007) 308-315. dx.doi.org/10.1016/j.bbaexp.2007.01.002
Houben A, Schroeder-Reiter E, Nagaki K, Nasuda S, Wanner G, Murata M, Endo T R CENH3 interacts with the centromeric retrotransposon cereba and GC-rich satellites and locates to centromeric substructures in barley. Chromosoma 116 (2007) 275-283. dx.doi.org/10.1007/s00412-007-0102-z
Houben A, Schubert I Engineered plant minichromosomes: a resurrection of B chromosomes? Plant Cell 19 (2007) 2323-2327. dx.doi.org/10.1105/tpc.107.053603
Houben A, Schubert I The cytogenetics and genomics of crop plants - Foreword. Chromosome Res. 15 (2007) 1-2. dx.doi.org/10.1007/s10577-006-1110-1
Houben A, Schubert I (Eds.) Special Issue: The cytogenetics and genomics of crop plants. No. 1. (Series: Chromosome Res., Vol. 15) (2007) 121 pp.
Marschner S Ursprung, Zusammensetzung und Transkriptionsaktivität der B-Chromosomen von Brachycome dichromosomatica. (PhD Thesis) Berlin, Humboldt-Universität zu Berlin (2007) 91 pp.
Marschner S, Kumke K, Houben A B chromosomes of B. dichromosomatica show a reduced level of euchromatic histone H3 methylation marks. Chromosome Res. 15 (2007) 215-222. dx.doi.org/10.1007/s10577-006-1114-x
Marschner S, Meister A, Blattner F R, Houben A Evolution and function of B chromosome 45S rDNA sequences in Brachycome dichromosomatica. Genome 50 (2007) 638-644. dx.doi.org/10.1139/G07-048
Schubert V, Kim Y M, Berr A, Fuchs J, Meister A, Marschner S, Schubert I Random homologous pairing and incomplete sister chromatid alignment are common in angiosperm interphase nuclei. Mol. Genet. Genomics 278 (2007) 167-176. dx.doi.org/10.1007/s00438-007-0242-0
2006
Caperta A D, Delgado M, Ressurreicao F, Meister A, Jones R N, Viegas W, Houben A Colchicine-induced polyploidization depends on tubulin polymerization in c-metaphase cells. Protoplasma 227 (2006) 147-153. dx.doi.org/10.1007/s00709-005-0137-z
Field B L, Houben A, Timmis J N, Leach C R Internal transcribed spacer sequence analyses indicate cytoevolutionary patterns within Brachycome Cass. (Asteraceae). Plant Syst. Evol. 259 (2006) 39-51. dx.doi.org/10.1007/s00606-005-0400-y
Fuchs J, Demidov D, Houben A, Schubert I Chromosomal histone modification patterns- from conservation to diversity. (Erratum TiPS 11 (2006) 212). Trends Plant Sci. 11 (2006) 199-208. dx.doi.org/10.1016/j.tplants.2006.02.008
Gernand D, Rutten T, Pickering R, Houben A Elimination of chromosomes in Hordeum vulgare x H. bulbosum crosses at mitosis and interphase involves micronucleus formation and progressive heterochromatinization. Cytogenet. Genome Res. 114 (2006) 169-174. dx.doi.org/10.1159/000093334
Houben A, Orford S J, Timmis J N In situ hybridization to plant tissues and chromosomes. In: Darby I A, Hewitson T D (Eds.): In situ hybridization protocols, 3rd ed. (Series: Methods in molecular biology, Vol. 326) Totowa, NJ: Humana Press (2006) 203-218. dx.doi.org/10.1385/1-59745-007-3:203 ISBN 1-588-29402-1
Launholt D, Merkle T, Houben A, Schulz A, Grasser K D Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus. Plant Cell 18 (2006) 2904-2918. dx.doi.org/10.1105/tpc.106.047274
Leach R C, Dundas I S, Houben A Construction of comparative genetic maps of two 4Bs.4Bl-5Rl translocations in bread wheat (Triticum aestivum L.). Genome 49 (2006) 729-734. dx.doi.org/10.1139/g06-040
Müller F, Houben A, Barker P E, Xiao Y, Käs J A, Melzer M Quantum dots - a versatile tool in plant science? J. Nanobiotechnol. 4 (2006) 5. dx.doi.org/10.1186/1477-3155-4-5
Schroeder-Reiter E, Houben A, Grau J, Wanner G Characterization of a peg-like terminal NOR structure with light microscopy and high-resolution scanning electron microscopy. Chromosoma 115 (2006) 50-59. dx.doi.org/10.1007/s00412-005-0030-8