Publications

Autoren Titel
2021
Hoang P T N, Rouillard J M, Macas J, Kubalová I, Schubert V, Schubert I Limitation of current probe design for oligo-cross-FISH, exemplified by chromosome evolution studies in duckweeds. Chromosoma (2021) Epub ahead of print. dx.doi.org/10.1007/s00412-020-00749-2
2020
Bog M, Sree K S, Fuchs J, Hoang P T N, Schubert I, Kuever J, Rabenstein A, Paolacci S, Jansen M A K, Appenroth K-J A taxonomic revision of Lemna sect. Uninerves (Lemnaceae). Taxon 69 (2020) 56-66. dx.doi.org/10.1002/tax.12188
Cao H X, Vu G T H Cytogenetics, epigenetics and karyotype evolution of duckweeds. In: Cao X H, Fourounjian P, Wang W (Eds.): The duckweed genomes. (Series: Compendium of plant genomes) Cham: Springer (2020) 47-57. doi.org/10.1007/978-3-030-11045-1_4
Hoang P T N, Fiebig A, Novák P, Macas J, Cao H X, Stepanenko A, Chen G, Borisjuk N, Scholz U, Schubert I Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries. Sci. Rep. 10 (2020) 19230. dx.doi.org/10.1038/s41598-020-75728-9
Nowicka A, Tokarz B, Zwyrtková J, Dvořák Tomaštíková E, Procházková K, Ercan U, Finke A, Rozhon W, Poppenberger B, Otmar M, Niezgodzki I, Krečmerová M, Schubert I, Pecinka A Comparative analysis of epigenetic inhibitors reveals different degrees of interference with transcriptional gene silencing and induction of DNA damage. Plant J. 102 (2020) 68-84. dx.doi.org/10.1111/tpj.14612
Palfalvi G, Hackl T, Terhoeven N, Shibata T F, Nishiyama T, Ankenbrand M, Becker D, Förster F, Freund M, Iosip A, Kreuzer I, Saul F, Kamida C, Fukushima K, Shigenobu S, Tamada Y, Adamec L, Hoshi Y, Ueda K, Winkelmann T, Fuchs J, Schubert I, Schwacke R, Al-Rasheid K, Schultz J, Hasebe M, Hedrich R Genomes of the Venus flytrap and close relatives unveil the roots of plant carnivory. Curr. Biol. 30 (2020) 2312-2320. dx.doi.org/10.1016/j.cub.2020.04.051
Schubert V, Neumann P, Marques A, Heckmann S, Macas J, Pedrosa-Harand A, Schubert I, Jang T-S, Houben A Super-resolution microscopy reveals diversity of plant centromere architecture. Int. J. Mol. Sci. 21 (2020) 3488. dx.doi.org/10.3390/ijms21103488
2019
Finke A, Mandáková T, Nawaz K, Vu G T H, Novák P, Macas J, Lysak M A, Pecinka A Genome invasion by a hypomethylated satellite repeat in Australian crucifer Ballantinia antipoda. Plant J. 99 (2019) 1066-1079. dx.doi.org/10.1111/tpj.14380
Hoang P T N, Schubert I Combination of various sequencing, assembly and mapping approaches, creating a reliable genome assembly for emerging aquatic crops. GIT Laboratory J. 23 (2019) 14-17.
Hoang P T N, Schubert V, Meister A, Fuchs J, Schubert I Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds. Sci. Rep. 9 (2019) 3234. dx.doi.org/10.1038/s41598-019-39332-w
Houben A, Schubert I Bericht zur Internationalen Konferenz Plant genome stability and change" (03.-06-06.2018 in Gatersleben)." Leopoldina-Jahrbuch 2018 (2019) 311-314.
2018
Ávila Robledillo L, Koblížková A, Novák P, Böttinger K, Vrbová I, Neumann P, Schubert I, Macas J Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing. Sci. Rep. 8 (2018) 5838. dx.doi.org/10.1038/s41598-018-24196-3
Hoang P N T, Michael T P, Gilbert S, Chu P, Motley T S, Appenroth K J, Schubert I, Lam E Generating a high-confidence reference genome map of the Greater Duckweed by integration of cytogenomic, optical mapping and Oxford Nanopore technologies. Plant J. 96 (2018) 670-684. dx.doi.org/10.1111/tpj.14049
Schubert I What is behind centromere repositioning"?" Chromosoma 127 (2018) 229-234. dx.doi.org/10.1007/s00412-018-0672-y
2017
Baroux C, Pecinka A, Fuchs J, Kreth G, Schubert I, Grossniklaus U Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma 126 (2017) 115-124. dx.doi.org/10.1007/s00412-016-0578-5
Hoang P T N, Schubert I Reconstruction of chromosome rearrangements between the two most ancestral duckweed species Spirodela polyrhiza and S. intermedia. Chromosoma 126 (2017) 729-739. dx.doi.org/10.1007/s00412-017-0636-7
Schubert I Some past developments and open questions in understanding the biology of nucleus. The Nucleus 60 (2017) 247-249. dx.doi.org/10.1007/s13237-017-0217-4
Tran T D, Šimková H, Schmidt R, Doležel J, Schubert I, Fuchs J Chromosome identification for the carnivorous plant Genlisea margaretae. Chromosoma 126 (2017) 389–397. dx.doi.org/10.1007/s00412-016-0599-0
Vu G T H, Cao H X, Fauser F, Reiss B, Puchta H, Schubert I Endogenous sequence patterns predispose the repair modes of CRISPR/Cas9-induced DNA double strand breaks in Arabidopsis thaliana. Plant J. 92 (2017) 57-67. dx.doi.org/10.1111/tpj.13634
Vu G T H, Cao H X, Reiss B, Schubert I Deletion-bias in DNA double-strand break repair differentially contributes to plant genome shrinkage. New Phytol. 214 (2017) 1712–1721. dx.doi.org/10.1111/nph.14490