Publications

Autoren Titel
2020
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Quantification of recombination rate and segregation distortion by genotyping and sequencing of single pollen nuclei. In: Pradillo M, Heckmann S (Eds.): Plant Meiosis: methods and protocols. (Series: Methods in molecular biology, Vol. 2061) New York, NY: Humana Press (2020) 281-300. dx.doi.org/10.1007/978-1-4939-9818-0_20 978-1-4939-9817-3
2019
Breen J, Rabanus-Wallace M T New tricks for old wheat. Nat. Plants 5 (2019) 1108-1109. dx.doi.org/10.1038/s41477-019-0528-3
Bustos-Korts D, Dawson I K, Russell J, Tondelli A, Guerra D, Ferrandi C, Strozzi F, Nicolazzi E L, Molnar-Lang M, Ozkan H, Megyeri M, Miko P, Cakir E, Yakisir E, Trabanco N, Delbono S, Kyriakidis S, Booth A, Cammarano D, Mascher M, Werner P, Cattivelli L, Rossini L, Stein N, Kilian B, Waugh R, van Eeuwijk F A Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. Plant J. 99 (2019) 1172-1191. dx.doi.org/10.1111/tpj.14414
Darrier B, Russell J, Milner S G, Hedley P E, Shaw P D, Macaulay M, Ramsay L D, Halpin C, Mascher M, Fleury D L, Langridge P, Stein N, Waugh R A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources. Front. Plant Sci. 10 (2019) 544. dx.doi.org/10.3389/fpls.2019.00544
Hoseinzadeh H, Zhou R, Mascher M, Himmelbach A, Niks R E, Schweizer P, Stein N High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley. Front. Plant Sci. 10 (2019) 146. dx.doi.org/10.3389/fpls.2019.00146
Jain A, Roorkiwal M, Kale S, Garg V, Yadala R, Varshney R K InDel markers: An extended marker resource for molecular breeding in chickpea. PLoS One 14 (2019) e0213999. dx.doi.org/10.1371/journal.pone.0213999
Jost M, Szurman-Zubrzycka M, Gajek K, Szarejko I, Stein N TILLING in barley. In: Harwood W A (Ed.): Barley: methods and protocols. (Series: Methods in molecular biology, Vol. 1900) New York, NY: Humana Press (2019) 73-94. dx.doi.org/10.1007/978-1-4939-8944-7_6 978-1-4939-8944-7
Keilwagen J, Lehnert H, Berner T, Beier S, Scholz U, Himmelbach A, Stein N, Badaeva E D, Lang D, Kilian B, Hackauf B, Perovic D Detecting large chromosomal modifications using short read data from genotyping-by-sequencing. Front. Plant Sci. 10 (2019) 1133. dx.doi.org/10.3389/fpls.2019.01133
Li M, Hensel G, Mascher M, Melzer M, Budhagatapalli N, Rutten T, Himmelbach A, Beier S, Korzun V, Kumlehn J, Boerner T, Stein N Leaf variegation and impaired chloroplast development caused by a truncated CCT domain gene in albostrians barley. Plant Cell 31 (2019) 1430-1445. dx.doi.org/10.1105/tpc.19.00132
Maccaferri M, Harris N S, Twardziok S O, Pasam R K, Gundlach H, Spannagl M, Ormanbekova D, Lux T, Prade V M, Milner S G, Himmelbach A, Mascher M, Bagnaresi P, Faccioli P, Cozzi P, Lauria M, Lazzari B, Stella A, Manconi A, Gnocchi M, Moscatelli M, Avni R, Deek J, Biyiklioglu S, Frascaroli E, Corneti S, Salvi S, Sonnante G, Desiderio F, Mare C, Crosatti C, Mica E, Ozkan H, Kilian B, De Vita P, Marone D, Joukhadar R, Mazzucotelli E, Nigro D, Gadaleta A, Chao S, Faris J D, Melo A T O, Pumphrey M, Pecchioni N, Milanesi L, Wiebe K, Ens J, MacLachlan R P, Clarke J M, Sharpe A G, Koh C S, Liang K Y H, Taylor G J, Knox R, Budak H, Mastrangelo A M, Xu S S, Stein N, Hale I, Distelfeld A, Hayden M J, Tuberosa R, Walkowiak S, Mayer K F X, Ceriotti A, Pozniak C J, Cattivelli L Durum wheat genome highlights past domestication signatures and future improvement targets. Nat. Genet. 51 (2019) 885-895. dx.doi.org/10.1038/s41588-019-0381-3
Mascher M, Schreiber M, Scholz U, Graner A, Reif J C, Stein N Genebank genomics bridges the gap between the conservation of crop diversity and plant breeding. Nat. Genet. 51 (2019) 1076-1081. dx.doi.org/10.1038/s41588-019-0443-6
Melonek J, Zhou R, Bayer P E, Edwards D, Stein N, Small I High intraspecific diversity of Restorer-of-fertility-like genes in barley. Plant J. 97 (2019) 281-295. dx.doi.org/10.1111/tpj.14115
Milner S G, Jost M, Taketa S, Mazón E R, Himmelbach A, Oppermann M, Weise S, Knüpffer H, Basterrechea M, König P, Schüler D, Sharma R, Pasam R K, Rutten T, Guo G, Xu D, Zhang J, Herren G, Müller T, Krattinger S G, Keller B, Jiang Y, González M Y, Zhao Y, Habekuß A, Färber S, Ordon F, Lange M, Börner A, Graner A, Reif J C, Scholz U, Mascher M, Stein N Genebank genomics highlights the diversity of a global barley collection. Nat. Genet. 51 (2019) 319-326. doi.org/10.1038/s41588-018-0266-x
Monat C, Schreiber M, Stein N, Mascher M Prospects of pan-genomics in barley. Theor. Appl. Genet. 132 (2019) 785–796. dx.doi.org/10.1007/s00122-018-3234-z
Padmarasu S, Himmelbach A, Mascher M, Stein N In situ Hi-C for plants: an improved method to detect long-range chromatin interactions. In: Chekanova J, Wang H-L (Eds.): Plant long non-coding RNAs: methods and protocols. (Series: Methods in molecular biology, Vol. 1933) New York, NY: Humana Press (2019) 441-472. doi.org/10.1007/978-1-4939-9045-0_28 ISBN 978-1-4939-9044-3
Pidon H, Stein N Mapping and exploiting the barley genome – techniques for mapping genes and relating them to desirable traits. In: Fox G, Li C (Eds.): Achieving sustainable cultivation of barley. (Burleigh Dodds Series in Agricultural Science, Vol. 74) Cambridge, UK: Burleigh Dodds (2019) in press. ISBN 978-1-78676-308-2
Pont C, Leroy T, Seidel M, Tondelli A, Duchemin W, Armisen D, Lang D, Bustos-Korts D, Goué N, Balfourier F, Molnár-Láng M, Lage J, Kilian B, Özkan H, Waite D, Dyer S, Letellier T, Alaux M, Russell J, Keller B, van Eeuwijk F, Spannagl M, Mayer K F X, Waugh R, Stein N, Cattivelli L, Haberer G, Charmet G, Salse J, Wheat and Barley Legacy for Breeding Improvement Consortium Tracing the ancestry of modern bread wheats. Nat. Genet. 51 (2019) 905-911. dx.doi.org/10.1038/s41588-019-0393-z
Rabanus-Wallace M T, Stein N Progress in sequencing of Triticeae genomes and future uses. In: Miedaner T, Korzun V (Eds.): Applications of genetic and genomic research in cereals. (Woodhead Publishing Series in Food Science, Technology and Nutrition) Duxford, UK u.a.: Elsevier Ltd. (2019) 19-48. doi.org/10.1016/B978-0-08-102163-7.00002-8 ISBN 978-0-08-102163-7
Radchuk V, Sharma R, Potokina E, Radchuk R, Weier D, Munz E, Schreiber M, Mascher M, Stein N, Wicker T, Kilian B, Borisjuk L The highly divergent Jekyll genes, required for sexual reproduction, are lineage specific for the related grass tribes Triticeae and Bromeae. Plant J. 98 (2019) 961-974. dx.doi.org/10.1111/tpj.14363
Schreiber M, Himmelbach A, Börner A, Mascher M Genetic diversity and relationship of domesticated rye and its wild relatives as revealed through genotyping-by-sequencing. Evol. Appl. 12 (2019) 66-77. dx.doi.org/10.1111/eva.12624
White L C, Fontsere C, Lizano E, Hughes D A, Angedakin S, Arandjelovic M, Granjon A C, Hans J B, Lester J D, Rabanus-Wallace M T, Rowney C, Städele V, Marques-Bonet T, Langergraber K E, Vigilant L A roadmap for high-throughput sequencing studies of wild animal populations using non-invasive samples and hybridization capture. Mol. Ecol. Resour. 19 (2019) 609-622. dx.doi.org/10.1111/1755-0998.12993
2018
Altmann S, Muino J M, Lortzing V, Brandt R, Himmelbach A, Altschmied L, Hilker M Transcriptomic basis for reinforcement of elm antiherbivore defence mediated by insect egg deposition. Mol. Ecol. 27 (2018) 4901-4915. dx.doi.org/10.1111/mec.14900
Brandt R, Mascher M, Thiel J Laser-capture microdissection-based RNA-seq of barley grain tissues. In: Murray G I (Ed.): Laser Capture Microdissection: Methods and Protocols. (Series: Methods in molecular biology, Vol. 1723) New York, NY: Humana Press (2018) 397-409. doi.org/10.1007/978-1-4939-7558-7_23 ISBN 978-1-4939-7557-0
Braumann I, Dockter C, Beier S, Himmelbach A, Lok F, Lundqvist U, Skadhauge B, Stein N, Zakhrabekova S, Zhou R, Hansson M Mutations in the gene of the Gα subunit of the heterotrimeric G protein are the cause for the brachytic1 semi-dwarf phenotype in barley and applicable for practical breeding. Hereditas 155 (2018) 10. dx.doi.org/10.1186/s41065-017-0045-1
Chen J, Scholz U, Zhou R, Lange M LAILAPS-QSM: A RESTful API and JAVA library for semantic query suggestions. PLoS Comput. Biol. 14 (2018) e1006058. dx.doi.org/10.1371/journal.pcbi.1006058
Hansson M, Komatsuda T, Stein N, Muehlbauer G J Molecular mapping and cloning of genes and QTLs. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 139-154. dx.doi.org/10.1007/978-3-319-92528-8_10 ISBN 978-3-319-92528-8
Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species. Plant J. 96 (2018) 1309-1316. dx.doi.org/10.1111/tpj.14109
Himmelbach A, Walde I, Mascher M, Stein N Tethered chromosome conformation capture sequencing in Triticeae: a valuable tool for genome assembly. Bio-protocol 8 (2018) e2955. dx.doi.org/10.21769/BioProtoc.2955
Hoseinzadeh P High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley. (PhD Thesis) Göttingen, Georg-August-Universität (2018) 134 pp.
Li J, Zhou R, Endo T R, Stein N High-throughput development of SSR marker candidates and their chromosomal assignment in rye (Secale cereale L.). Plant Breed. 137 (2018) 561-572. dx.doi.org/10.1111/pbr.12619
Prade V M, Gundlach H, Twardziok S, Chapman B, Tan C, Langridge P, Schulman A H, Stein N, Waugh R, Zhang G, Platzer M, Li C, Spannagl M, Mayer K F X The pseudogenes of barley. Plant J. 93 (2018) 502-514. dx.doi.org/10.1111/tpj.13794
Rajaraman J, Douchkov D, Lück S, Hensel G, Nowara D, Pogoda M, Rutten T, Meitzel T, Brassac J, Höfle C, Hückelhoven R, Klinkenberg J, Trujillo M, Bauer E, Schmutzer T, Himmelbach A, Mascher M, Lazzari B, Stein N, Kumlehn J, Schweizer P Evolutionarily conserved partial gene duplication in the Triticeae tribe of grasses confers pathogen resistance. Genome Biol. 19 (2018) 116. dx.doi.org/10.1186/s13059-018-1472-7
Romero C C T, Vermeulen J P, Vels A, Himmelbach A, Mascher M, Niks R E Mapping resistance to powdery mildew in barley reveals a large-effect nonhost resistance QTL. Theor. Appl. Genet. 131 (2018) 1031–1045. dx.doi.org/10.1007/s00122-018-3055-0
Roorkiwal M, Jarquin D, Singh M K, Gaur P M, Bharadwaj C, Rathore A, Howard R, Srinivasan S, Jain A, Garg V, Kale S, Chitikineni A, Tripathi S, Jones E, Robbins K R, Crossa J, Varshney R K Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype x environment interaction on prediction accuracy in chickpea. Sci. Rep. 8 (2018) 11701. dx.doi.org/10.1038/s41598-018-30027-2
Šarhanová P, Pfanzelt S, Brandt R, Himmelbach A, Blattner F R SSR-seq: Genotyping of microsatellites using next-generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring. Ecol. Evol. 8 (2018) 10817-10833. dx.doi.org/10.1002/ece3.4533
Schreiber M, Stein N, Mascher M Genomic approaches for studying crop evolution. Genome Biol. 19 (2018) 140. dx.doi.org/10.1186/s13059-018-1528-8
Stein N, Mascher M Barley genome sequencing amd assembly - a first version reference sequence. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 57-71. dx.doi.org/10.1007/978-3-319-92528-8_5 ISBN 978-3-319-92528-8
Stein N, Muehlbauer G J (Eds.) The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) : Springer International Publishing AG (2018) XVIII, 394 pp. ISBN 978-3-319-92528-8
The International Wheat Genome Sequencing Consortium (IWGSC; IPK authors: Mascher M, Zhou, R., Himmelbach, A. & co-corresponding author: Stein, N.) Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science 361 (2018) eaar7191. dx.doi.org/10.1126/science.aar7191
Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, Zha S, Li S, Tang Y, Bai L, Zhuang Z, He W, Zhao S, Fang X, Gao Q, Yin Y, Wang J, Yang H, Zhang J, Henry R J, Stein N, Tashi N Origin and evolution of qingke barley in Tibet. Nat. Commun. 9 (2018) 5433. dx.doi.org/10.1038/s41467-018-07920-5
2017
Avni R, Nave M, Barad O, Baruch K, Twardziok S O, Gundlach H, Hale I, Mascher M, Spannagl M, Wiebe K, Jordan K W, Golan G, Deek J, Ben-Zvi B, Ben-Zvi G, Himmelbach A, MacLachlan R P, Sharpe A G, Fritz A, Ben-David R, Budak H, Fahima T, Korol A, Faris J D, Hernandez A, Mikel M A, Levy A A, Steffenson B, Maccaferri M, Tuberosa R, Cattivelli L, Faccioli P, Ceriotti A, Kashkush K, Pourkheirandish M, Komatsuda T, Eilam T, Sela H, Sharon A, Ohad N, Chamovitz D A, Mayer K F X, Stein N, Ronen G, Peleg Z, Pozniak C J, Akhunov E D, Distelfeld A Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science 357 (2017) 93-97. dx.doi.org/10.1126/science.aan0032
Beier S, Himmelbach A, Colmsee C, Zhang X-Q, Barrero R A, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer G J, Kersey P, Clark M D, Caccamo M, Schulman A H, Platzer M, Close T J, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Sci. Data 4 (2017) 170044. dx.doi.org/10.1038/sdata.2017.44
Braatz J, Harloff H-J, Mascher M, Stein N, Himmelbach A, Jung C CRISPR-Cas9 targeted mutagenesis leads to simultaneous modification of different homoeologous gene copies in polyploid oilseed rape (Brassica napus). Plant Physiol. 174 (2017) 935-942. dx.doi.org/10.1104/pp.17.00426
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Sequencing of single pollen nuclei reveals meiotic recombination events at megabase resolution and circumvents segregation distortion caused by postmeiotic processes. Front. Plant Sci. 8 (2017) 1620. dx.doi.org/10.3389/fpls.2017.01620
Jost M Cloning of the plant development regulatory genes MANY NODED DWARF (MND) and LAXATUM-A (LAX-A) by taking advantage of on improved barley genomics infrastructure. 18. Kurt von Rümker-Vorträge. Vortr. Pflanzenzücht. 86 (2017) 51-58.
Ma W, Gabriel T S, Martis M M, Gursinsky T, Schubert V, Vrana J, Dolezel J, Grundlach H, Altschmied L, Scholz U, Himmelbach A, Behrens S E, Banaei-Moghaddam A M, Houben A Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog. New Phytol. 213 (2017) 916-928. dx.doi.org/10.1111/nph.14110
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok S O, Wicker T, Radchuk V, Dockter C, Hedley P E, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang X-Q, Zhang Q, Barrero R A, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer G J, Clark M D, Caccamo M, Schulman A H, Mayer K F X, Platzer M, Close T J, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N A chromosome conformation capture ordered sequence of the barley genome. Nature 544 (2017) 427-433. dx.doi.org/10.1038/nature22043
Stoll A, Harpke D, Schütte C, Stefanczyk N, Brandt R, Blattner F R, Quandt D Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing. PLoS One 12 (2017) e0178402. dx.doi.org/10.1371/journal.pone.0178402
Wendler N, Mascher M, Himmelbach A, Bini F, Kumlehn J, Stein N A high-density, sequence-enriched genetic map of Hordeum bulbosum and its collinearity to H. vulgare. Plant Genome 10 (2017) dx.doi.org/10.3835/plantgenome2017.06.0049
Wicker T, Schulman A H, Tanskanen J, Spannagl M, Twardziok S, Mascher M, Springer N M, Li Q, Waugh R, Li C, Zhang G, Stein N, Mayer K F X, Gundlach H The repetitive landscape of the 5100 Mbp barley genome. Mobile DNA 8 (2017) 22. dx.doi.org/10.1186/s13100-017-0102-3
Yang P, Habekuß A, Hofinger B J, Kanyuka K, Kilian B, Graner A, Ordon F, Stein N Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia. Theor. Appl. Genet. 130 (2017) 331-344. dx.doi.org/10.1007/s00122-016-2814-z
Youssef H M, Mascher M, Ayoub M A, Stein N, Kilian B, Schnurbusch T Natural diversity of inflorescence architecture traces cryptic domestication genes in barley (Hordeum vulgare L.). Genet. Resour. Crop Evol. 64 (2017) 843-853. dx.doi.org/10.1007/s10722-017-0504-6
2016
Aliyeva-Schnorr L, Stein N, Houben A Collinearity of homoeologous group 3 chromosomes in the genus Hordeum and Secale cereale as revealed by 3H-derived FISH analysis. Chromosome Res. 24 (2016) 231-242. dx.doi.org/10.1007/s10577-016-9518-8
Beier S, Himmelbach A, Schmutzer T, Felder M, Taudien S, Mayer K F X, Platzer M, Stein N, Scholz U, Mascher M Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes. Plant Biotechnol. J. 14 (2016) 1511-1522. dx.doi.org/10.1111/pbi.12511
Houben A, Karimi Ashtiyani R, Ishii T, Stein N, Kumlehn J Generation of haploid plants. (Industrieanmeldung), Veröffentlichung: 03.03.2016, IPK-Nr. 2014/01. EP 14182719.6 (2016).
Huu C N, Kappel C, Keller B, Sicard A, Takebayashi Y, Breuninger H, Nowak M D, Baurle I, Himmelbach A, Burkart M, Ebbing-Lohaus T, Sakakibara H, Altschmied L, Conti E, Lenhard M Presence versus absence of CYP734A50 underlies the style-length dimorphism in primroses. eLife 5 (2016) e17956. dx.doi.org/10.7554/eLife.17956
Jost M Cloning of the plant development regulatory genes MANY NODED DWARF (MND) and LAXATUM-A (LAX-A) by taking advantage of an improved barley genomics infrastructure. (PhD Thesis) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Institut für Agrar- und Ernährungswissenschaften der Naturwissenschaftlichen Fakultät III (2016) 184 pp.
Jöst M, Hensel G, Kappel C, Druka A, Sicard A, Hohmann U, Beier S, Himmelbach A, Waugh R, Kumlehn J, Stein N, Lenhard M The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Curr. Biol. 26 (2016) 903-909. dx.doi.org/10.1016/j.cub.2016.01.047
Jost M, Taketa S, Mascher M, Himmelbach A, Yuo T, Shahinnia F, Rutten T, Druka A, Schmutzer T, Steuernagel B, Beier S, Taudien S, Scholz U, Morgante M, Waugh R, Stein N A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiol. 171 (2016) 1113-1127. dx.doi.org/10.1104/pp.16.00124
Mascher M, Schuenemann V J, Davidovich U, Marom N, Himmelbach A, Hübner S, Korol A, David M, Reiter E, Riehl S, Schreiber M, Vohr S H, Green R E, Dawson I K, Russell J, Kilian B, Muehlbauer G J, Waugh R, Fahima T, Krause J, Weiss E, Stein N Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nat. Genet. 48 (2016) 1089-1093. dx.doi.org/10.1038/ng.3611
Nakamura S, Pourkheirandish M, Morishige H, Kubo Y, Nakamura M, Ichimura K, Seo S, Kanamori H, Wu J, Ando T, Hensel G, Sameri M, Stein N, Sato K, Matsumoto T, Yano M, Komatsuda T Mitogen-Activated Protein Kinase 3 regulates seed dormancy in barley. Curr. Biol. 26 (2016) 775-781. dx.doi.org/10.1016/j.cub.2016.01.024
Russell J, Mascher M, Dawson I K, Kyriakidis S, Calixto C, Freund F, Bayer M, Milne I, Marshall-Griffiths T, Heinen S, Hofstad A, Sharma R, Himmelbach A, Knauft M, van Zonneveld M, Brown J W, Schmid K, Kilian B, Muehlbauer G J, Stein N, Waugh R Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nat. Genet. 48 (2016) 1024-1030. dx.doi.org/10.1038/ng.3612
Wendler N Unlocking the secondary gene pool of barley for breeding and research. (PhD Thesis, kumulativ) Halle/S., Martin-Luther-Universität Halle-Wittenberg, Institut für Agrar- und Ernährungswissenschaften der Naturwissenschaftlichen Fakultät III (2016) 111 pp.
2015
Aliyeva-Schnorr L, Beier S, Karafiátová M, Schmutzer T, Scholz U, Doležel J, Stein N, Houben A Cytogenetic mapping with centromeric BAC contigs shows that this recombination-poor region comprises more than half of barley chromosome 3H. Plant J. 84 (2015) 385–394. dx.doi.org/10.1111/tpj.13006
Banaei-Moghaddam A M, Martis M M, Macas J, Gundlach H, Himmelbach A, Altschmied L, Mayer K F, Houben A Genes on B chromosomes: Old questions revisited with new tools. Biochim. Biophys. Acta 1849 (2015) 64-70. dx.doi.org/10.1016/j.bbagrm.2014.11.007
Brown R H, Singh J, Singh S, Dahleen L S, Lemaux P G, Stein N, Mascher M, Bregitzer P Behavior of a modified Dissociation element in barley: a tool for genetic studies and for breeding transgenic barley. Mol. Breed. 35 (2015) 85. dx.doi.org/10.1007/s11032-015-0193-9
Chapman J A, Mascher M, Buluç A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Seghal S, Oliker L, Schmutz J, Yelick K A, Scholz U, Waugh R, Poland J A, Muehlbauer G J, Stein N, Rokhsar D S A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biol. 16 (2015) 26. dx.doi.org/10.1186/s13059-015-0582-8
Colmsee C, Beier S, Himmelbach A, Schmutzer T, Stein N, Scholz U, Mascher M BARLEX – the barley draft genome explorer. Mol. Plant 8 (2015) 964-966. dx.doi.org/10.1016/j.molp.2015.03.009
Cviková K, Cattonaro F, Alaux M, Stein N, Mayer K F, Doležel J, Bartoš J High-throughput physical map anchoring via BAC-pool sequencing. BMC Plant Biol. 15 (2015) 99. dx.doi.org/10.1186/s12870-015-0429-1
Karimi-Ashtiyani R, Ishii T, Niessen M, Stein N, Heckmann S, Gurushidze M, Banaei-Moghaddam A M, Fuchs J, Schubert V, Koch K, Weiss O, Demidov D, Schmidt K, Kumlehn J, Houben A Point mutation impairs centromeric CENH3 loading and induces haploid plants. Proc. Natl. Acad. Sci. U.S.A. 112 (2015) 11211-11216. dx.doi.org/10.1073/pnas.1504333112
Li J, Gyawali Y P, Zhou R, Stein N, Nasuda S, Endo T R Comparative study of the structure of chromosome 1R derived from Secale montanum and Secale cereale. Plant Breed. 134 (2015) 675-683. dx.doi.org/10.1111/pbr.12314
Li M Map-based cloning of the gene albostrians in barley (Hordeum vulgare L.). (PhD Thesis) Berlin, Humboldt-Universität zu Berlin, Lebenswissenschaftliche Fakultät (2015) 140 pp.
Muñoz-Amatriaín M, Lonardi S, Luo M, Madishetty K, Svensson J, Moscou M, Wanamaker S, Jiang T, Kleinhofs A, Muehlbauer G, Wise R, Stein N, Ma Y, Rodriguez E, Kudrna D, Bhat P R, Chao S, Condamine P, Heinen S, Resnik J, Wing R, Witt H N, Alpert M, Beccuti M, Bozdag S, Cordero F, Mirebrahim H, Ounit R, Wu Y, You F, Zheng J, Šimková H, Doležel J, Grimwood J, Schmutz J, Duma D, Altschmied L, Blake T, Bregitzer P, Cooper L, Dilbirligi M, Falk A, Feiz L, Graner A, Gustafson P, Hayes P, Lemaux P, Mammadov J, Close T Sequencing of 15,622 gene-bearing BACs clarifies the gene-dense regions of the barley genome. Plant J. 84 (2015) 216-227. dx.doi.org/10.1111/tpj.12959
Neumann K, Klukas C, Friedel S, Rischbeck P, Chen D, Entzian A, Stein N, Graner A, Kilian B Dissecting spatio-temporal biomass accumulation in barley under different water regimes using high-throughput image analysis. Plant Cell Environ. 38 (2015) 1980-1996. dx.doi.org/10.1111/pce.12516
Perovic J, Silvar C, Perovic D, Stein N, Ordon F Fluorescence-based CAPS multiplex genotyping on capillary electrophoresis systems. Bio-protocol 5 (2015) e1472.
Pourkheirandish M, Hensel G, Kilian B, Senthil N, Chen G, Sameri M, Azhaguvel P, Sakuma S, Dhanagond S, Sharma R, Mascher M, Himmelbach A, Gottwald S, Nair S K, Tagiri A, Yukuhiro F, Nagamura Y, Kanamori H, Matsumoto T, Willcox G, Middleton C P, Wicker T, Walther A, Waugh R, Fincher G B, Stein N, Kumlehn J, Sato K, Komatsuda T Evolution of the grain dispersal system in barley. Cell 162 (2015) 527-539. dx.doi.org/10.1016/j.cell.2015.07.002
Staňková H, Valárik M, Lapitan N V, Berkman P, Batley J, Edwards D, Luo M-C, Tulpová Z, Kubaláková M, Stein N, Doležel J, Šimková H Chromosomal genomics facilitates fine mapping of a Russian wheat aphid resistance gene. Theor. Appl. Genet. 128 (2015) 1373-1383. dx.doi.org/10.1007/s00122-015-2512-2
Tavakol E, Okagaki R, Verderio G, Shariati V, Hussien A, Bilgic H, Scanlon M J, Todt N R, Close T J, Druka A, Waugh R, Steuernagel B, Ariyadasa R, Himmelbach A, Stein N, Muehlbauer G J, Rossini L The barley Uniculme4 gene encodes a BLADE-ON-PETIOLE-like protein that controls tillering and leaf patterning. Plant Physiol. 168 (2015) 164-174. dx.doi.org/10.1104/pp.114.252882
Ui H, Sameri M, Pourkheirandish M, Chang M C, Shimada H, Stein N, Komatsuda T, Handa H High-resolution genetic mapping and physical map construction for the fertility restorer Rfm1 locus in barley. Theor. Appl. Genet. 128 (2015) 283-290. dx.doi.org/10.1007/s00122-014-2428-2
Vu G T H, Schmutzer T, Bull F, Cao H X, Fuchs J, Tran D T, Jovtchev G, Pistrick K, Stein N, Pecinka A, Neumann P, Novák P, Macas J, Dear P H, Blattner F R, Scholz U, Schubert I Comparative genome analysis reveals divergent genome size evolution in a carnivorous plant genus. Plant Genome 8 (2015) 1-14. dx.doi.org/10.3835/plantgenome2015.04.0021
Wendler N, Mascher M, Himmelbach A, Johnston P, Pickering R, Stein N Bulbosum to go: a toolbox to utilize Hordeum vulgare/ bulbosum introgressions for breeding and beyond. Mol. Plant 8 (2015) 1507-1519. dx.doi.org/10.1016/j.molp.2015.05.004
Zakhrabekova S, Dockter C, Ahmann K, Braumann I, Gough S P, Wendt T, Lundqvist U, Mascher M, Stein N, Hansson M Genetic linkage facilitates cloning of Ert-m regulating plant architecture in barley and identified a strong candidate of Ant1 involved in anthocyanin biosynthesis. Plant Mol. Biol. 88 (2015) 609-626. dx.doi.org/10.1007/s11103-015-0350-x
Zang W, Eckstein P E, Colin M, Voth D, Himmelbach A, Beier S, Stein N, Scoles G J, Beattie A D Fine mapping and identification of a candidate gene for the barley Un8 true loose smut resistance gene. Theor. Appl. Genet. 128 (2015) 1343-1357. dx.doi.org/10.1007/s00122-015-2510-4

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