Publikationen

Autoren Titel
2020
Bog M, Xu S, Himmelbach A, Brandt R, Wagner F, Appenroth K J, Sree K S Genotyping-by-sequencing for species delimitation in Lemna section Uninerves Hegelm. (Lemnaceae). In: Cao X H, Fourounjian P, Wang W (Eds.): The duckweed genomes. (Series: Compendium of plant genomes) Cham: Springer (2020) 115-123. doi.org/10.1007/978-3-030-11045-1_11
Chu J, Zhao Y, Beier S, Schulthess A W, Stein N, Philipp N, Röder M S, Reif J C Suitability of single-nucleotide polymorphism arrays versus genotyping-by-sequencing for genebank genomics in wheat. Front. Plant Sci. 11 (2020) 42. dx.doi.org/10.3389/fpls.2020.00042
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Quantification of recombination rate and segregation distortion by genotyping and sequencing of single pollen nuclei. In: Pradillo M, Heckmann S (Eds.): Plant Meiosis: methods and protocols. (Series: Methods in molecular biology, Vol. 2061) New York, NY: Humana Press (2020) 281-300. dx.doi.org/10.1007/978-1-4939-9818-0_20 978-1-4939-9817-3
Gao L, Koo D H, Juliana P, Rife T, Singh D, Lemes da Silva C, Lux T, Dorn K M, Clinesmith M, Silva P, Wang X, Spannagl M, Monat C, Friebe B, Steuernagel B, Muehlbauer G J, Walkowiak S, Pozniak C, Singh R, Stein N, Mascher M, Fritz A, Poland J The Aegilops ventricosa 2NvS segment in bread wheat: cytology, genomics and breeding. Theor. Appl. Genet. (2020) Epub ahead of print. dx.doi.org/10.1007/s00122-020-03712-y
Haas M, Himmelbach A, Mascher M The contribution of cis- and trans-acting variants to gene regulation in wild and domesticated barley under cold stress and control conditions. J. Exp. Bot. 71 (2020) 2573-2584. dx.doi.org/10.1093/jxb/eraa036
Hoseinzadeh P, Ruge-Wehling B, Schweizer P, Stein N, Pidon H High resolution mapping of a Hordeum bulbosum-derived powdery mildew resistance locus in barley using distinct homologous introgression lines. Front. Plant Sci. 11 (2020) 225. dx.doi.org/10.3389/fpls.2020.00225
Jayakodi M, Padmarasu S, Haberer G, Bonthala V S, Gundlach H, Monat C, Lux T, Kamal N, Lang D, Himmelbach A, Ens J, Zhang X Q, Angessa T T, Zhou G, Tan C, Hill C, Wang P, Schreiber M, Boston L B, Plott C, Jenkins J, Guo Y, Fiebig A, Budak H, Xu D, Zhang J, Wang C, Grimwood J, Schmutz J, Guo G, Zhang G, Mochida K, Hirayama T, Sato K, Chalmers K J, Langridge P, Waugh R, Pozniak C J, Scholz U, Mayer K F X, Spannagl M, Li C, Mascher M, Stein N The barley pan-genome reveals the hidden legacy of mutation breeding. Nature 588 (2020) 284-289. dx.doi.org/10.1038/s41586-020-2947-8
König P, Beier S, Basterrechea M, Schüler D, Arend D, Mascher M, Stein N, Scholz U, Lange M BRIDGE – a visual analytics web tool for barley genebank genomics. Front. Plant Sci. 11 (2020) 701. dx.doi.org/10.3389/fpls.2020.00701
Liu F, Zhao Y, Beier S, Jiang Y, Thorwarth P, Longin C F H, Ganal M, Himmelbach A, Reif J C, Schulthess A W Exome association analysis sheds light onto leaf rust (Puccinia triticina) resistance genes currently used in wheat breeding (Triticum aestivum L.). Plant Biotechnol. J. 18 (2020) 1396-1408. dx.doi.org/10.1111/pbi.13303
McCouch S, Navabi K, Abberton M, Anglin N L, Barbieri R L, Baum M, Bett K, Booker H, Brown G L, Bryan G J, Cattivelli L, Charest D, Eversole K, Freitas M, Ghamkhar K, Grattapaglia D, Henry R, Valadares Inglis M C, Islam T, Kehel Z, Kersey P J, Kresovich S, Marden E, Mayes S, Ndjiondjop M N, Nguyen H T, Paiva S, Papa R, Phillips P W B, Rasheed A, Richards C, Rouard M, Amstalden Sampaio M J, Scholz U, Shaw P D, Sherman B, Staton S E, Stein N, Svensson J, Tester M, Montenegro Valls J F, Varshney R, Visscher S, von Wettberg E, Waugh R, Wenzl P W B, Rieseberg L H Mobilizing crop biodiversity. Mol. Plant 13 (2020) 1341-1344. dx.doi.org/10.1016/j.molp.2020.08.011
Pidon H, Stein N Mapping and exploiting the barley genome – techniques for mapping genes and relating them to desirable traits. In: Fox G, Li C (Eds.): Achieving sustainable cultivation of barley. (Burleigh Dodds Series in Agricultural Science, Vol. 74) Cambridge, UK: Burleigh Dodds (2020) 123-158. ISBN 978-1-78676-308-2
Pidon H, Wendler N, Habekubeta A, Maasberg A, Ruge-Wehling B, Perovic D, Ordon F, Stein N High-resolution mapping of Rym14Hb, a wild relative resistance gene to barley yellow mosaic disease. Theor. Appl. Genet. (2020) Epub ahead of print. dx.doi.org/10.1007/s00122-020-03733-7
Poursarebani N, Trautewig C, Melzer M, Nussbaumer T, Lundqvist U, Rutten T, Schmutzer T, Brandt R, Himmelbach A, Altschmied L, Koppolu R, Youssef H M, Sibout R, Dalmais M, Bendahmane A, Stein N, Xin Z, Schnurbusch T COMPOSITUM 1 contributes to the architectural simplification of barley inflorescence via meristem identity signals. Nat. Commun. 11 (2020) 5138. dx.doi.org/10.1038/s41467-020-18890-y
Reddy Kunam J Genome-wide association studies of different spike traits and grain traits in a population of European two-rowed spring barleys. (Master Thesis) Göttingen, Georg-August-Universität (2020) 76 pp.
Ruban A, Schmutzer T, Wu D D, Fuchs J, Boudichevskaia A, Rubtsova M, Pistrick K, Melzer M, Himmelbach A, Schubert V, Scholz U, Houben A Supernumerary B chromosomes of Aegilops speltoides undergo precise elimination in roots early in embryo development. Nat. Commun. 11 (2020) 2764. dx.doi.org/10.1038/s41467-020-16594-x
Schreiber M, Mascher M, Wright J, Padmarasu S, Himmelbach A, Heavens D, Milne L, Clavijo B J, Stein N, Waugh R A genome assembly of the barley 'transformation reference' cultivar Golden Promise. G3 Genes Genomes Genetics 10 (2020) 1823-1827. dx.doi.org/10.1534/g3.119.401010
Shimizu K K, Copetti D, Okada M, Wicker T, Tameshige T, Hatakeyama M, Shimizu-Inatsugi R, Aquino C, Nishimura K, Kobayashi F, Murata K, Kuo T, Delorean E, Poland J, Haberer G, Spannagl M, Mayer K F X, Gutierrez-Gonzalez J, Muehlbauer G J, Monat C, Himmelbach A, Padmarasu S, Mascher M, Walkowiak S, Nakazaki T, Ban T, Kawaura K, Tsuji H, Pozniak C, Stein N, Sese J, Nasuda S, Handa H De novo genome assembly of the Japanese wheat cultivar Norin 61 highlights functional variation in flowering time and Fusarium resistance genes in East Asian genotypes. Plant Cell Physiol. (2020) accepted. dx.doi.org/10.1093/pcp/pcaa152
Tikhenko N, Alqudah A M, Borisjuk L, Ortleb S, Rutten T, Wu D D, Nagel M, Himmelbach A, Mascher M, Röder M, Ganal M, Sehmisch S, Houben A, Börner A DEFECTIVE ENDOSPERM-D1 (Dee-D1) is crucial for endosperm development in hexaploid wheat. Commun Biol 3 (2020) 791. doi.org/10.1038/s42003-020-01509-9
Walkowiak S, Gao L, Monat C, Haberer G, Kassa M T, Brinton J, Ramirez-Gonzalez R H, Kolodziej M C, Delorean E, Thambugala D, Klymiuk V, Byrns B, Gundlach H, Bandi V, Siri J N, Nilsen K, Aquino C, Himmelbach A, Copetti D, Ban T, Venturini L, Bevan M, Clavijo B, Koo D H, Ens J, Wiebe K, N'Diaye A, Fritz A K, Gutwin C, Fiebig A, Fosker C, Fu B X, Accinelli G G, Gardner K A, Fradgley N, Gutierrez-Gonzalez J, Halstead-Nussloch G, Hatakeyama M, Koh C S, Deek J, Costamagna A C, Fobert P, Heavens D, Kanamori H, Kawaura K, Kobayashi F, Krasileva K, Kuo T, McKenzie N, Murata K, Nabeka Y, Paape T, Padmarasu S, Percival-Alwyn L, Kagale S, Scholz U, Sese J, Juliana P, Singh R, Shimizu-Inatsugi R, Swarbreck D, Cockram J, Budak H, Tameshige T, Tanaka T, Tsuji H, Wright J, Wu J, Steuernagel B, Small I, Cloutier S, Keeble-Gagnere G, Muehlbauer G, Tibbets J, Nasuda S, Melonek J, Hucl P J, Sharpe A G, Clark M, Legg E, Bharti A, Langridge P, Hall A, Uauy C, Mascher M, Krattinger S G, Handa H, Shimizu K K, Distelfeld A, Chalmers K, Keller B, Mayer K F X, Poland J, Stein N, McCartney C A, Spannagl M, Wicker T, Pozniak C J Multiple wheat genomes reveal global variation in modern breeding. Nature 588 (2020) 277-283. dx.doi.org/10.1038/s41586-020-2961-x
Youssef H M, Allam M, Boussora F, Himmelbach A, Milner S G, Mascher M, Schnurbusch T Dissecting the genetic basis of lateral and central spikelet development and grain traits in intermedium-spike barley (Hordeum vulgare convar. intermedium). Plants 9 (2020) 1655. dx.doi.org/10.3390/plants9121655
2019
Agarwal G, Clevenger J, Kale S M, Wang H, Pandey M K, Choudhary D, Yuan M, Wang X, Culbreath A K, Holbrook C C, Liu X, Varshney R K, Guo B A recombination bin-map identified a major QTL for resistance to Tomato Spotted Wilt Virus in peanut (Arachis hypogaea). Sci. Rep. 9 (2019) 18246. dx.doi.org/10.1038/s41598-019-54747-1
Awais M Genetic mapping of a locus on chromosome 7H controlling barb formation on barley awns. (Master Thesis) Göttingen, Georg-August-Universität (2019) 35 pp.
Breen J, Rabanus-Wallace M T New tricks for old wheat. Nat. Plants 5 (2019) 1108-1109. dx.doi.org/10.1038/s41477-019-0528-3
Bustos-Korts D, Dawson I K, Russell J, Tondelli A, Guerra D, Ferrandi C, Strozzi F, Nicolazzi E L, Molnar-Lang M, Ozkan H, Megyeri M, Miko P, Cakir E, Yakisir E, Trabanco N, Delbono S, Kyriakidis S, Booth A, Cammarano D, Mascher M, Werner P, Cattivelli L, Rossini L, Stein N, Kilian B, Waugh R, van Eeuwijk F A Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. Plant J. 99 (2019) 1172-1191. dx.doi.org/10.1111/tpj.14414
Darrier B, Russell J, Milner S G, Hedley P E, Shaw P D, Macaulay M, Ramsay L D, Halpin C, Mascher M, Fleury D L, Langridge P, Stein N, Waugh R A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources. Front. Plant Sci. 10 (2019) 544. dx.doi.org/10.3389/fpls.2019.00544
Hoseinzadeh H, Zhou R, Mascher M, Himmelbach A, Niks R E, Schweizer P, Stein N High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley. Front. Plant Sci. 10 (2019) 146. dx.doi.org/10.3389/fpls.2019.00146
Jain A, Roorkiwal M, Kale S, Garg V, Yadala R, Varshney R K InDel markers: An extended marker resource for molecular breeding in chickpea. PLoS One 14 (2019) e0213999. dx.doi.org/10.1371/journal.pone.0213999
Jost M, Szurman-Zubrzycka M, Gajek K, Szarejko I, Stein N TILLING in barley. In: Harwood W A (Ed.): Barley: methods and protocols. (Series: Methods in molecular biology, Vol. 1900) New York, NY: Humana Press (2019) 73-94. dx.doi.org/10.1007/978-1-4939-8944-7_6 978-1-4939-8944-7
Keilwagen J, Lehnert H, Berner T, Beier S, Scholz U, Himmelbach A, Stein N, Badaeva E D, Lang D, Kilian B, Hackauf B, Perovic D Detecting large chromosomal modifications using short read data from genotyping-by-sequencing. Front. Plant Sci. 10 (2019) 1133. dx.doi.org/10.3389/fpls.2019.01133
Li M, Hensel G, Mascher M, Melzer M, Budhagatapalli N, Rutten T, Himmelbach A, Beier S, Korzun V, Kumlehn J, Boerner T, Stein N Leaf variegation and impaired chloroplast development caused by a truncated CCT domain gene in albostrians barley. Plant Cell 31 (2019) 1430-1445. dx.doi.org/10.1105/tpc.19.00132
Maccaferri M, Harris N S, Twardziok S O, Pasam R K, Gundlach H, Spannagl M, Ormanbekova D, Lux T, Prade V M, Milner S G, Himmelbach A, Mascher M, Bagnaresi P, Faccioli P, Cozzi P, Lauria M, Lazzari B, Stella A, Manconi A, Gnocchi M, Moscatelli M, Avni R, Deek J, Biyiklioglu S, Frascaroli E, Corneti S, Salvi S, Sonnante G, Desiderio F, Mare C, Crosatti C, Mica E, Ozkan H, Kilian B, De Vita P, Marone D, Joukhadar R, Mazzucotelli E, Nigro D, Gadaleta A, Chao S, Faris J D, Melo A T O, Pumphrey M, Pecchioni N, Milanesi L, Wiebe K, Ens J, MacLachlan R P, Clarke J M, Sharpe A G, Koh C S, Liang K Y H, Taylor G J, Knox R, Budak H, Mastrangelo A M, Xu S S, Stein N, Hale I, Distelfeld A, Hayden M J, Tuberosa R, Walkowiak S, Mayer K F X, Ceriotti A, Pozniak C J, Cattivelli L Durum wheat genome highlights past domestication signatures and future improvement targets. Nat. Genet. 51 (2019) 885-895. dx.doi.org/10.1038/s41588-019-0381-3
Mascher M, Schreiber M, Scholz U, Graner A, Reif J C, Stein N Genebank genomics bridges the gap between the conservation of crop diversity and plant breeding. Nat. Genet. 51 (2019) 1076-1081. dx.doi.org/10.1038/s41588-019-0443-6
Melonek J, Zhou R, Bayer P E, Edwards D, Stein N, Small I High intraspecific diversity of Restorer-of-fertility-like genes in barley. Plant J. 97 (2019) 281-295. dx.doi.org/10.1111/tpj.14115
Milner S G, Jost M, Taketa S, Mazón E R, Himmelbach A, Oppermann M, Weise S, Knüpffer H, Basterrechea M, König P, Schüler D, Sharma R, Pasam R K, Rutten T, Guo G, Xu D, Zhang J, Herren G, Müller T, Krattinger S G, Keller B, Jiang Y, González M Y, Zhao Y, Habekuß A, Färber S, Ordon F, Lange M, Börner A, Graner A, Reif J C, Scholz U, Mascher M, Stein N Genebank genomics highlights the diversity of a global barley collection. Nat. Genet. 51 (2019) 319-326. doi.org/10.1038/s41588-018-0266-x
Monat C, Padmarasu S, Lux T, Wicker T, Gundlach H, Himmelbach A, Ens J, Li C, Muehlbauer G J, Schulman A H, Waugh R, Braumann I, Pozniak C, Scholz U, Mayer K F X, Spannagl M, Stein N, Mascher M TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools. Genome Biol. 20 (2019) 284. dx.doi.org/10.1186/s13059-019-1899-5
Monat C, Schreiber M, Stein N, Mascher M Prospects of pan-genomics in barley. Theor. Appl. Genet. 132 (2019) 785–796. dx.doi.org/10.1007/s00122-018-3234-z
Padmarasu S, Himmelbach A, Mascher M, Stein N In situ Hi-C for plants: an improved method to detect long-range chromatin interactions. In: Chekanova J, Wang H-L (Eds.): Plant long non-coding RNAs: methods and protocols. (Series: Methods in molecular biology, Vol. 1933) New York, NY: Humana Press (2019) 441-472. doi.org/10.1007/978-1-4939-9045-0_28 ISBN 978-1-4939-9044-3
Pont C, Leroy T, Seidel M, Tondelli A, Duchemin W, Armisen D, Lang D, Bustos-Korts D, Goué N, Balfourier F, Molnár-Láng M, Lage J, Kilian B, Özkan H, Waite D, Dyer S, Letellier T, Alaux M, Russell J, Keller B, van Eeuwijk F, Spannagl M, Mayer K F X, Waugh R, Stein N, Cattivelli L, Haberer G, Charmet G, Salse J, Wheat and Barley Legacy for Breeding Improvement Consortium Tracing the ancestry of modern bread wheats. Nat. Genet. 51 (2019) 905-911. dx.doi.org/10.1038/s41588-019-0393-z
Rabanus-Wallace M T, Stein N Progress in sequencing of Triticeae genomes and future uses. In: Miedaner T, Korzun V (Eds.): Applications of genetic and genomic research in cereals. (Woodhead Publishing Series in Food Science, Technology and Nutrition) Duxford, UK u.a.: Elsevier Ltd. (2019) 19-48. doi.org/10.1016/B978-0-08-102163-7.00002-8 ISBN 978-0-08-102163-7
Radchuk V, Sharma R, Potokina E, Radchuk R, Weier D, Munz E, Schreiber M, Mascher M, Stein N, Wicker T, Kilian B, Borisjuk L The highly divergent Jekyll genes, required for sexual reproduction, are lineage specific for the related grass tribes Triticeae and Bromeae. Plant J. 98 (2019) 961-974. dx.doi.org/10.1111/tpj.14363
Schreiber M, Himmelbach A, Börner A, Mascher M Genetic diversity and relationship of domesticated rye and its wild relatives as revealed through genotyping-by-sequencing. Evol. Appl. 12 (2019) 66-77. dx.doi.org/10.1111/eva.12624
White L C, Fontsere C, Lizano E, Hughes D A, Angedakin S, Arandjelovic M, Granjon A C, Hans J B, Lester J D, Rabanus-Wallace M T, Rowney C, Städele V, Marques-Bonet T, Langergraber K E, Vigilant L A roadmap for high-throughput sequencing studies of wild animal populations using non-invasive samples and hybridization capture. Mol. Ecol. Resour. 19 (2019) 609-622. dx.doi.org/10.1111/1755-0998.12993
2018
Altmann S, Muino J M, Lortzing V, Brandt R, Himmelbach A, Altschmied L, Hilker M Transcriptomic basis for reinforcement of elm antiherbivore defence mediated by insect egg deposition. Mol. Ecol. 27 (2018) 4901-4915. dx.doi.org/10.1111/mec.14900
Brandt R, Mascher M, Thiel J Laser-capture microdissection-based RNA-seq of barley grain tissues. In: Murray G I (Ed.): Laser Capture Microdissection: Methods and Protocols. (Series: Methods in molecular biology, Vol. 1723) New York, NY: Humana Press (2018) 397-409. doi.org/10.1007/978-1-4939-7558-7_23 ISBN 978-1-4939-7557-0
Braumann I, Dockter C, Beier S, Himmelbach A, Lok F, Lundqvist U, Skadhauge B, Stein N, Zakhrabekova S, Zhou R, Hansson M Mutations in the gene of the Gα subunit of the heterotrimeric G protein are the cause for the brachytic1 semi-dwarf phenotype in barley and applicable for practical breeding. Hereditas 155 (2018) 10. dx.doi.org/10.1186/s41065-017-0045-1
Chen J, Scholz U, Zhou R, Lange M LAILAPS-QSM: A RESTful API and JAVA library for semantic query suggestions. PLoS Comput. Biol. 14 (2018) e1006058. dx.doi.org/10.1371/journal.pcbi.1006058
Hansson M, Komatsuda T, Stein N, Muehlbauer G J Molecular mapping and cloning of genes and QTLs. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 139-154. dx.doi.org/10.1007/978-3-319-92528-8_10 ISBN 978-3-319-92528-8
Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species. Plant J. 96 (2018) 1309-1316. dx.doi.org/10.1111/tpj.14109
Himmelbach A, Walde I, Mascher M, Stein N Tethered chromosome conformation capture sequencing in Triticeae: a valuable tool for genome assembly. Bio-protocol 8 (2018) e2955. dx.doi.org/10.21769/BioProtoc.2955
Hoseinzadeh P High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley. (PhD Thesis) Göttingen, Georg-August-Universität (2018) 134 pp.
Li J, Zhou R, Endo T R, Stein N High-throughput development of SSR marker candidates and their chromosomal assignment in rye (Secale cereale L.). Plant Breed. 137 (2018) 561-572. dx.doi.org/10.1111/pbr.12619
Prade V M, Gundlach H, Twardziok S, Chapman B, Tan C, Langridge P, Schulman A H, Stein N, Waugh R, Zhang G, Platzer M, Li C, Spannagl M, Mayer K F X The pseudogenes of barley. Plant J. 93 (2018) 502-514. dx.doi.org/10.1111/tpj.13794
Rajaraman J, Douchkov D, Lück S, Hensel G, Nowara D, Pogoda M, Rutten T, Meitzel T, Brassac J, Höfle C, Hückelhoven R, Klinkenberg J, Trujillo M, Bauer E, Schmutzer T, Himmelbach A, Mascher M, Lazzari B, Stein N, Kumlehn J, Schweizer P Evolutionarily conserved partial gene duplication in the Triticeae tribe of grasses confers pathogen resistance. Genome Biol. 19 (2018) 116. dx.doi.org/10.1186/s13059-018-1472-7
Romero C C T, Vermeulen J P, Vels A, Himmelbach A, Mascher M, Niks R E Mapping resistance to powdery mildew in barley reveals a large-effect nonhost resistance QTL. Theor. Appl. Genet. 131 (2018) 1031–1045. dx.doi.org/10.1007/s00122-018-3055-0
Roorkiwal M, Jarquin D, Singh M K, Gaur P M, Bharadwaj C, Rathore A, Howard R, Srinivasan S, Jain A, Garg V, Kale S, Chitikineni A, Tripathi S, Jones E, Robbins K R, Crossa J, Varshney R K Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype x environment interaction on prediction accuracy in chickpea. Sci. Rep. 8 (2018) 11701. dx.doi.org/10.1038/s41598-018-30027-2
Šarhanová P, Pfanzelt S, Brandt R, Himmelbach A, Blattner F R SSR-seq: Genotyping of microsatellites using next-generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring. Ecol. Evol. 8 (2018) 10817-10833. dx.doi.org/10.1002/ece3.4533
Schreiber M, Stein N, Mascher M Genomic approaches for studying crop evolution. Genome Biol. 19 (2018) 140. dx.doi.org/10.1186/s13059-018-1528-8
Stein N, Mascher M Barley genome sequencing amd assembly - a first version reference sequence. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 57-71. dx.doi.org/10.1007/978-3-319-92528-8_5 ISBN 978-3-319-92528-8
Stein N, Muehlbauer G J (Eds.) The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) : Springer International Publishing AG (2018) XVIII, 394 pp. ISBN 978-3-319-92528-8
The International Wheat Genome Sequencing Consortium (IWGSC; IPK authors: Mascher M, Zhou, R., Himmelbach, A. & co-corresponding author: Stein, N.) Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science 361 (2018) eaar7191. dx.doi.org/10.1126/science.aar7191
Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, Zha S, Li S, Tang Y, Bai L, Zhuang Z, He W, Zhao S, Fang X, Gao Q, Yin Y, Wang J, Yang H, Zhang J, Henry R J, Stein N, Tashi N Origin and evolution of qingke barley in Tibet. Nat. Commun. 9 (2018) 5433. dx.doi.org/10.1038/s41467-018-07920-5
2017
Avni R, Nave M, Barad O, Baruch K, Twardziok S O, Gundlach H, Hale I, Mascher M, Spannagl M, Wiebe K, Jordan K W, Golan G, Deek J, Ben-Zvi B, Ben-Zvi G, Himmelbach A, MacLachlan R P, Sharpe A G, Fritz A, Ben-David R, Budak H, Fahima T, Korol A, Faris J D, Hernandez A, Mikel M A, Levy A A, Steffenson B, Maccaferri M, Tuberosa R, Cattivelli L, Faccioli P, Ceriotti A, Kashkush K, Pourkheirandish M, Komatsuda T, Eilam T, Sela H, Sharon A, Ohad N, Chamovitz D A, Mayer K F X, Stein N, Ronen G, Peleg Z, Pozniak C J, Akhunov E D, Distelfeld A Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science 357 (2017) 93-97. dx.doi.org/10.1126/science.aan0032
Beier S, Himmelbach A, Colmsee C, Zhang X-Q, Barrero R A, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer G J, Kersey P, Clark M D, Caccamo M, Schulman A H, Platzer M, Close T J, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Sci. Data 4 (2017) 170044. dx.doi.org/10.1038/sdata.2017.44
Braatz J, Harloff H-J, Mascher M, Stein N, Himmelbach A, Jung C CRISPR-Cas9 targeted mutagenesis leads to simultaneous modification of different homoeologous gene copies in polyploid oilseed rape (Brassica napus). Plant Physiol. 174 (2017) 935-942. dx.doi.org/10.1104/pp.17.00426
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Sequencing of single pollen nuclei reveals meiotic recombination events at megabase resolution and circumvents segregation distortion caused by postmeiotic processes. Front. Plant Sci. 8 (2017) 1620. dx.doi.org/10.3389/fpls.2017.01620
Jost M Cloning of the plant development regulatory genes MANY NODED DWARF (MND) and LAXATUM-A (LAX-A) by taking advantage of on improved barley genomics infrastructure. 18. Kurt von Rümker-Vorträge. Vortr. Pflanzenzücht. 86 (2017) 51-58.
Ma W, Gabriel T S, Martis M M, Gursinsky T, Schubert V, Vrana J, Dolezel J, Grundlach H, Altschmied L, Scholz U, Himmelbach A, Behrens S E, Banaei-Moghaddam A M, Houben A Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog. New Phytol. 213 (2017) 916-928. dx.doi.org/10.1111/nph.14110
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok S O, Wicker T, Radchuk V, Dockter C, Hedley P E, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang X-Q, Zhang Q, Barrero R A, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer G J, Clark M D, Caccamo M, Schulman A H, Mayer K F X, Platzer M, Close T J, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N A chromosome conformation capture ordered sequence of the barley genome. Nature 544 (2017) 427-433. dx.doi.org/10.1038/nature22043
Stoll A, Harpke D, Schütte C, Stefanczyk N, Brandt R, Blattner F R, Quandt D Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing. PLoS One 12 (2017) e0178402. dx.doi.org/10.1371/journal.pone.0178402
Wendler N, Mascher M, Himmelbach A, Bini F, Kumlehn J, Stein N A high-density, sequence-enriched genetic map of Hordeum bulbosum and its collinearity to H. vulgare. Plant Genome 10 (2017) dx.doi.org/10.3835/plantgenome2017.06.0049
Wicker T, Schulman A H, Tanskanen J, Spannagl M, Twardziok S, Mascher M, Springer N M, Li Q, Waugh R, Li C, Zhang G, Stein N, Mayer K F X, Gundlach H The repetitive landscape of the 5100 Mbp barley genome. Mobile DNA 8 (2017) 22. dx.doi.org/10.1186/s13100-017-0102-3
Yang P, Habekuß A, Hofinger B J, Kanyuka K, Kilian B, Graner A, Ordon F, Stein N Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia. Theor. Appl. Genet. 130 (2017) 331-344. dx.doi.org/10.1007/s00122-016-2814-z
Youssef H M, Mascher M, Ayoub M A, Stein N, Kilian B, Schnurbusch T Natural diversity of inflorescence architecture traces cryptic domestication genes in barley (Hordeum vulgare L.). Genet. Resour. Crop Evol. 64 (2017) 843-853. dx.doi.org/10.1007/s10722-017-0504-6

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