Publikationen

Autoren Titel
2019
Bustos-Korts D, Dawson I K, Russell J, Tondelli A, Guerra D, Ferrandi C, Strozzi F, Nicolazzi E L, Molnar-Lang M, Ozkan H, Megyeri M, Miko P, Cakir E, Yakisir E, Trabanco N, Delbono S, Kyriakidis S, Booth A, Cammarano D, Mascher M, Werner P, Cattivelli L, Rossini L, Stein N, Kilian B, Waugh R, van Eeuwijk F A Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. Plant J. (2019) Epub ahead of print. dx.doi.org/10.1111/tpj.14414
Darrier B, Russell J, Milner S G, Hedley P E, Shaw P D, Macaulay M, Ramsay L D, Halpin C, Mascher M, Fleury D L, Langridge P, Stein N, Waugh R A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources. Front. Plant Sci. 10 (2019) 544. dx.doi.org/10.3389/fpls.2019.00544
Dreissig S, Mascher M, Heckmann S Variation in recombination rate is shaped by domestication and environmental conditions in barley. Mol. Biol. Evol. (2019) accepted. dx.doi.org/10.1093/molbev/msz141
Gutierrez-Gonzalez J J, Mascher M, Poland J, Muehlbauer G J Dense genotyping-by-sequencing linkage maps of two Synthetic W7984xOpata reference populations provide insights into wheat structural diversity. Sci. Rep. 9 (2019) 1793. dx.doi.org/10.1038/s41598-018-38111-3
Haas M, Schreiber M, Mascher M Domestication and crop evolution of wheat and barley: Genes, genomics, and future directions. J. Integr. Plant Biol. 61 (2019) 204-225. dx.doi.org/10.1111/jipb.12737
Heuermann M C, Rosso M G, Mascher M, Brandt R, Tschiersch H, Altschmied L, Altmann T Combining next-generation sequencing and progeny testing for rapid identification of induced recessive and dominant mutations in maize M2 individuals. Plant J. (2019) Epub ahead of print. dx.doi.org/10.1111/tpj.14431
Hoseinzadeh H, Zhou R, Mascher M, Himmelbach A, Niks R E, Schweizer P, Stein N High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley. Front. Plant Sci. 10 (2019) 146. dx.doi.org/10.3389/fpls.2019.00146
Li M, Hensel G, Mascher M, Melzer M, Budhagatapalli N, Rutten T, Himmelbach A, Beier S, Korzun V, Kumlehn J, Boerner T, Stein N Leaf variegation and impaired chloroplast development caused by a truncated CCT domain gene in albostrians barley. Plant Cell 31 (2019) 1430-1445. dx.doi.org/10.1105/tpc.19.00132
Maccaferri M, Harris N S, Twardziok S O, Pasam R K, Gundlach H, Spannagl M, Ormanbekova D, Lux T, Prade V M, Milner S G, Himmelbach A, Mascher M, Bagnaresi P, Faccioli P, Cozzi P, Lauria M, Lazzari B, Stella A, Manconi A, Gnocchi M, Moscatelli M, Avni R, Deek J, Biyiklioglu S, Frascaroli E, Corneti S, Salvi S, Sonnante G, Desiderio F, Mare C, Crosatti C, Mica E, Ozkan H, Kilian B, De Vita P, Marone D, Joukhadar R, Mazzucotelli E, Nigro D, Gadaleta A, Chao S, Faris J D, Melo A T O, Pumphrey M, Pecchioni N, Milanesi L, Wiebe K, Ens J, MacLachlan R P, Clarke J M, Sharpe A G, Koh C S, Liang K Y H, Taylor G J, Knox R, Budak H, Mastrangelo A M, Xu S S, Stein N, Hale I, Distelfeld A, Hayden M J, Tuberosa R, Walkowiak S, Mayer K F X, Ceriotti A, Pozniak C J, Cattivelli L Durum wheat genome highlights past domestication signatures and future improvement targets. Nat. Genet. 51 (2019) 885-895. dx.doi.org/10.1038/s41588-019-0381-3
Mascher M, Schreiber M, Scholz U, Graner A, Reif J C, Stein N Genebank genomics bridges the gap between the conservation of crop diversity and plant breeding. Nat. Genet. 51 (2019) 1076-1081. dx.doi.org/10.1038/s41588-019-0443-6
Milne R J, Dibley K E, Schnippenkoetter W H, Mascher M, Lui A C, Wang L, Lo C, Ashton A R, Ryan P R, Lagudah E The wheat Lr67 gene of the Sugar Transport Protein 13 family confers multipathogen resistance in barley. Plant Physiol. 179 (2019) 1285-1297. dx.doi.org/10.1104/pp.18.00945
Milner S G, Jost M, Taketa S, Mazón E R, Himmelbach A, Oppermann M, Weise S, Knüpffer H, Basterrechea M, König P, Schüler D, Sharma R, Pasam R K, Rutten T, Guo G, Xu D, Zhang J, Herren G, Müller T, Krattinger S G, Keller B, Jiang Y, González M Y, Zhao Y, Habekuß A, Färber S, Ordon F, Lange M, Börner A, Graner A, Reif J C, Scholz U, Mascher M, Stein N Genebank genomics highlights the diversity of a global barley collection. Nat. Genet. 51 (2019) 319-326. doi.org/10.1038/s41588-018-0266-x
Monat C, Schreiber M, Stein N, Mascher M Prospects of pan-genomics in barley. Theor. Appl. Genet. 132 (2019) 785–796. dx.doi.org/10.1007/s00122-018-3234-z
Muqaddasi Q H, Jayakodi M, Börner A, Röder M S Identification of consistent QTL with large effect on anther extrusion in doubled haploid populations developed from spring wheat accessions in German Federal ex situ Genebank. Theor. Appl. Genet. (2019) Epub ahead of print. dx.doi.org/10.1007/s00122-019-03404-2
Padmarasu S, Himmelbach A, Mascher M, Stein N In situ Hi-C for plants: an improved method to detect long-range chromatin interactions. In: Chekanova J, Wang H-L (Eds.): Plant long non-coding RNAs: methods and protocols. (Series: Methods in molecular biology, Vol. 1933) New York, NY: Humana Press (2019) 441-472. doi.org/10.1007/978-1-4939-9045-0_28 ISBN 978-1-4939-9044-3
Radchuk V, Sharma R, Potokina E, Radchuk R, Weier D, Munz E, Schreiber M, Mascher M, Stein N, Wicker T, Kilian B, Borisjuk L The highly divergent Jekyll genes, required for sexual reproduction, are lineage specific for the related grass tribes Triticeae and Bromeae. Plant J. 98 (2019) 961-974. dx.doi.org/10.1111/tpj.14363
Sakuma S, Golan G, Guo Z, Ogawa T, Tagiri A, Sugimoto K, Bernhardt N, Brassac J, Mascher M, Hensel G, Ohnishi S, Jinno H, Yamashita Y, Ayalon I, Peleg Z, Schnurbusch T, Komatsuda T Unleashing floret fertility in wheat through the mutation of a homeobox gene. Proc. Natl. Acad. Sci. U.S.A. 116 (2019) 5182-5187. dx.doi.org/10.1073/pnas.1815465116
Schreiber M Ein Blick in die Kulturgeschichte von Roggen, Gerste & Weizen. (PhD Thesis) Mainz, Johannes Gutenberg-Universität Mainz, Fachbereich Anthropologie (2019) 399 pp.
Schreiber M, Himmelbach A, Börner A, Mascher M Genetic diversity and relationship of domesticated rye and its wild relatives as revealed through genotyping-by-sequencing. Evol. Appl. 12 (2019) 66-77. dx.doi.org/10.1111/eva.12624
Wolde G M, Mascher M, Schnurbusch T Genetic modification of spikelet arrangement in wheat increases grain number without significantly affecting grain weight. Mol. Genet. Genomics 294 (2019) 457–468. dx.doi.org/10.1007/s00438-018-1523-5
Wolde G M, Trautewig C, Mascher M, Schnurbusch T Genetic insights into morphometric inflorescence traits of wheat. Theor. Appl. Genet. 132 (2019) 1661-1676. dx.doi.org/10.1007/s00122-019-03305-4
2018
Brandt R, Mascher M, Thiel J Laser-capture microdissection-based RNA-seq of barley grain tissues. In: Murray G I (Ed.): Laser Capture Microdissection: Methods and Protocols. (Series: Methods in molecular biology, Vol. 1723) New York, NY: Humana Press (2018) 397-409. doi.org/10.1007/978-1-4939-7558-7_23 ISBN 978-1-4939-7557-0
Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species. Plant J. 96 (2018) 1309-1316. dx.doi.org/10.1111/tpj.14109
Himmelbach A, Walde I, Mascher M, Stein N Tethered chromosome conformation capture sequencing in Triticeae: a valuable tool for genome assembly. Bio-protocol 8 (2018) e2955. dx.doi.org/10.21769/BioProtoc.2955
Mascher M, Sato K, Steffenson B Genomics approaches to mining barley germplasm collections. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 155-169. dx.doi.org/10.1007/978-3-319-92528-8_11 ISBN 978-3-319-92528-8
Muñoz-Amatriaín M, Mascher M Sequence diversity and structural variation. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 109-122. dx.doi.org/10.1007/978-3-319-92528-8_8 ISBN 978-3-319-92528-8
Rajaraman J, Douchkov D, Lück S, Hensel G, Nowara D, Pogoda M, Rutten T, Meitzel T, Brassac J, Höfle C, Hückelhoven R, Klinkenberg J, Trujillo M, Bauer E, Schmutzer T, Himmelbach A, Mascher M, Lazzari B, Stein N, Kumlehn J, Schweizer P Evolutionarily conserved partial gene duplication in the Triticeae tribe of grasses confers pathogen resistance. Genome Biol. 19 (2018) 116. dx.doi.org/10.1186/s13059-018-1472-7
Romero C C T, Vermeulen J P, Vels A, Himmelbach A, Mascher M, Niks R E Mapping resistance to powdery mildew in barley reveals a large-effect nonhost resistance QTL. Theor. Appl. Genet. 131 (2018) 1031–1045. dx.doi.org/10.1007/s00122-018-3055-0
Schreiber M, Stein N, Mascher M Genomic approaches for studying crop evolution. Genome Biol. 19 (2018) 140. dx.doi.org/10.1186/s13059-018-1528-8
Stein N, Mascher M Barley genome sequencing amd assembly - a first version reference sequence. In: Stein N, Muehlbauer G J (Eds.): The Barley Genome, 1st ed. (Series: Kole, C (Ed.): Compendium of Plant Genomes) Cham: Springer (2018) 57-71. dx.doi.org/10.1007/978-3-319-92528-8_5 ISBN 978-3-319-92528-8
The International Wheat Genome Sequencing Consortium (IWGSC; IPK authors: Mascher M, Zhou, R., Himmelbach, A. & co-corresponding author: Stein, N.) Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science 361 (2018) eaar7191. dx.doi.org/10.1126/science.aar7191
Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, Zha S, Li S, Tang Y, Bai L, Zhuang Z, He W, Zhao S, Fang X, Gao Q, Yin Y, Wang J, Yang H, Zhang J, Henry R J, Stein N, Tashi N Origin and evolution of qingke barley in Tibet. Nat. Commun. 9 (2018) 5433. dx.doi.org/10.1038/s41467-018-07920-5
2017
Avni R, Nave M, Barad O, Baruch K, Twardziok S O, Gundlach H, Hale I, Mascher M, Spannagl M, Wiebe K, Jordan K W, Golan G, Deek J, Ben-Zvi B, Ben-Zvi G, Himmelbach A, MacLachlan R P, Sharpe A G, Fritz A, Ben-David R, Budak H, Fahima T, Korol A, Faris J D, Hernandez A, Mikel M A, Levy A A, Steffenson B, Maccaferri M, Tuberosa R, Cattivelli L, Faccioli P, Ceriotti A, Kashkush K, Pourkheirandish M, Komatsuda T, Eilam T, Sela H, Sharon A, Ohad N, Chamovitz D A, Mayer K F X, Stein N, Ronen G, Peleg Z, Pozniak C J, Akhunov E D, Distelfeld A Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science 357 (2017) 93-97. dx.doi.org/10.1126/science.aan0032
Bauer E, Schmutzer T, Barilar I, Mascher M, Gundlach H, Martis M M, Twardziok S O, Hackauf B, Gordillo A, Wilde P, Schmidt M, Korzun V, Mayer K F X, Schmid K, Schön C-C, Scholz U Towards a whole-genome sequence for rye (Secale cereale L.). Plant J. 89 (2017) 853-869. dx.doi.org/10.1111/tpj.13436
Beier S, Himmelbach A, Colmsee C, Zhang X-Q, Barrero R A, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer G J, Kersey P, Clark M D, Caccamo M, Schulman A H, Platzer M, Close T J, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Sci. Data 4 (2017) 170044. dx.doi.org/10.1038/sdata.2017.44
Beier S, Thiel T, Münch T, Scholz U, Mascher M MISA-web: a web server for microsatellite prediction. Bioinformatics 33 (2017) 2583–2585. dx.doi.org/10.1093/bioinformatics/btx198
Braatz J, Harloff H-J, Mascher M, Stein N, Himmelbach A, Jung C CRISPR-Cas9 targeted mutagenesis leads to simultaneous modification of different homoeologous gene copies in polyploid oilseed rape (Brassica napus). Plant Physiol. 174 (2017) 935-942. dx.doi.org/10.1104/pp.17.00426
Dreissig S, Fuchs J, Himmelbach A, Mascher M, Houben A Sequencing of single pollen nuclei reveals meiotic recombination events at megabase resolution and circumvents segregation distortion caused by postmeiotic processes. Front. Plant Sci. 8 (2017) 1620. dx.doi.org/10.3389/fpls.2017.01620
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok S O, Wicker T, Radchuk V, Dockter C, Hedley P E, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang X-Q, Zhang Q, Barrero R A, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke J K, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland J A, Bellgard M I, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer G J, Clark M D, Caccamo M, Schulman A H, Mayer K F X, Platzer M, Close T J, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N A chromosome conformation capture ordered sequence of the barley genome. Nature 544 (2017) 427-433. dx.doi.org/10.1038/nature22043
Meier A, Worch S, Böer E, Hartmann A, Mascher M, Marzec M, Scholz U, Riechen J, Baronian K, Schauer F, Bode R, Kunze G Agdc1p – a gallic acid decarboxylase involved in the degradation of 1 tannic acid in the yeast Blastobotrys (Arxula) adeninivorans. Front. Microbiol. 8 (2017) 1777. dx.doi.org/10.3389/fmicb.2017.01777
Wendler N, Mascher M, Himmelbach A, Bini F, Kumlehn J, Stein N A high-density, sequence-enriched genetic map of Hordeum bulbosum and its collinearity to H. vulgare. Plant Genome 10 (2017) dx.doi.org/10.3835/plantgenome2017.06.0049
Wicker T, Schulman A H, Tanskanen J, Spannagl M, Twardziok S, Mascher M, Springer N M, Li Q, Waugh R, Li C, Zhang G, Stein N, Mayer K F X, Gundlach H The repetitive landscape of the 5100 Mbp barley genome. Mobile DNA 8 (2017) 22. dx.doi.org/10.1186/s13100-017-0102-3
Youssef H M, Mascher M, Ayoub M A, Stein N, Kilian B, Schnurbusch T Natural diversity of inflorescence architecture traces cryptic domestication genes in barley (Hordeum vulgare L.). Genet. Resour. Crop Evol. 64 (2017) 843-853. dx.doi.org/10.1007/s10722-017-0504-6
2016
Beier S, Himmelbach A, Schmutzer T, Felder M, Taudien S, Mayer K F X, Platzer M, Stein N, Scholz U, Mascher M Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes. Plant Biotechnol. J. 14 (2016) 1511-1522. dx.doi.org/10.1111/pbi.12511
Jost M, Taketa S, Mascher M, Himmelbach A, Yuo T, Shahinnia F, Rutten T, Druka A, Schmutzer T, Steuernagel B, Beier S, Taudien S, Scholz U, Morgante M, Waugh R, Stein N A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiol. 171 (2016) 1113-1127. dx.doi.org/10.1104/pp.16.00124
Livaja M, Unterseer S, Erath W, Lehermeier C, Wieseke R, Plieske J, Polley A, Luerssen H, Wieckhorst S, Mascher M, Hahn V, Ouzunova M, Schön C C, Ganal M W Diversity analysis and genomic prediction of Sclerotinia resistance in sunflower using a new 25 K SNP genotyping array. Theor. Appl. Genet. 129 (2016) 317-329. dx.doi.org/10.1007/s00122-015-2629-3
Mascher M, Schuenemann V J, Davidovich U, Marom N, Himmelbach A, Hübner S, Korol A, David M, Reiter E, Riehl S, Schreiber M, Vohr S H, Green R E, Dawson I K, Russell J, Kilian B, Muehlbauer G J, Waugh R, Fahima T, Krause J, Weiss E, Stein N Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nat. Genet. 48 (2016) 1089-1093. dx.doi.org/10.1038/ng.3611
Nagel M, Kodde J, Pistrick S, Mascher M, Börner A, Groot S P C Barley seed ageing: genetics behind the dry elevated pressure of oxygen ageing and moist controlled deterioration. Front. Plant Sci. 7 (2016) 388. dx.doi.org/10.3389/fpls.2016.00388
Rauter M, Kasprzak J, Becker K, Riechen J, Worch S, Hartmann A, Mascher M, Scholz U, Baronian K, Bode R, Schauer F, Matthias Vorbrodt H, Kunze G Aadh2p: an Arxula adeninivorans alcohol dehydrogenase involved in the first step of the 1-butanol degradation pathway. Microb. Cell Fact. 15 (2016) 175. dx.doi.org/10.1186/s12934-016-0573-9
Russell J, Mascher M, Dawson I K, Kyriakidis S, Calixto C, Freund F, Bayer M, Milne I, Marshall-Griffiths T, Heinen S, Hofstad A, Sharma R, Himmelbach A, Knauft M, van Zonneveld M, Brown J W, Schmid K, Kilian B, Muehlbauer G J, Stein N, Waugh R Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nat. Genet. 48 (2016) 1024-1030. dx.doi.org/10.1038/ng.3612
2015
Brown R H, Singh J, Singh S, Dahleen L S, Lemaux P G, Stein N, Mascher M, Bregitzer P Behavior of a modified Dissociation element in barley: a tool for genetic studies and for breeding transgenic barley. Mol. Breed. 35 (2015) 85. dx.doi.org/10.1007/s11032-015-0193-9
Chapman J A, Mascher M, Buluç A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Seghal S, Oliker L, Schmutz J, Yelick K A, Scholz U, Waugh R, Poland J A, Muehlbauer G J, Stein N, Rokhsar D S A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biol. 16 (2015) 26. dx.doi.org/10.1186/s13059-015-0582-8
Colmsee C, Beier S, Himmelbach A, Schmutzer T, Stein N, Scholz U, Mascher M BARLEX – the barley draft genome explorer. Mol. Plant 8 (2015) 964-966. dx.doi.org/10.1016/j.molp.2015.03.009
Lermontova I, Sandmann M, Mascher M, Schmit A C, Chabouté M E Centromeric chromatin and its dynamics in plants. Plant J. 83 (2015) 4-17. dx.doi.org/10.1111/tpj.12875
Mascher M Genetische Verankerung und Anordnung von Sequenzassemblies zur Unterstützung der genombasierten Pflanzenzüchtung. 17. Kurt von Rümker-Vorträge. Vortr. Pflanzenzücht. 85 (2015) 63-67.
Pourkheirandish M, Hensel G, Kilian B, Senthil N, Chen G, Sameri M, Azhaguvel P, Sakuma S, Dhanagond S, Sharma R, Mascher M, Himmelbach A, Gottwald S, Nair S K, Tagiri A, Yukuhiro F, Nagamura Y, Kanamori H, Matsumoto T, Willcox G, Middleton C P, Wicker T, Walther A, Waugh R, Fincher G B, Stein N, Kumlehn J, Sato K, Komatsuda T Evolution of the grain dispersal system in barley. Cell 162 (2015) 527-539. dx.doi.org/10.1016/j.cell.2015.07.002
Spannagl M, Alaux M, Lange M, Bolser D M, Bader K C, Letellier T, Kimmel E, Flores R, Pommier C, Kerhornou A, Walts B, Nussbaumer T, Grabmuller C, Chen J, Colmsee C, Beier S, Mascher M, Schmutzer T, Arend D, Thanki A, Ramirez-Gonzalez R, Ayling M, Ayling S, Caccamo M, Mayer K F X, Scholz U, Steinbach D, Quesneville H, Kersey P J transPLANT resources for Triticeae genomic data. Plant Genome 9 (2015) 1-13. dx.doi.org/10.3835/plantgenome2015.06.0038
Wendler N, Mascher M, Himmelbach A, Johnston P, Pickering R, Stein N Bulbosum to go: a toolbox to utilize Hordeum vulgare/ bulbosum introgressions for breeding and beyond. Mol. Plant 8 (2015) 1507-1519. dx.doi.org/10.1016/j.molp.2015.05.004
Zakhrabekova S, Dockter C, Ahmann K, Braumann I, Gough S P, Wendt T, Lundqvist U, Mascher M, Stein N, Hansson M Genetic linkage facilitates cloning of Ert-m regulating plant architecture in barley and identified a strong candidate of Ant1 involved in anthocyanin biosynthesis. Plant Mol. Biol. 88 (2015) 609-626. dx.doi.org/10.1007/s11103-015-0350-x