Berkner M O, Weise S, Reif J C, Schulthess A W:

Genomic prediction reveals unexplored variation in grain protein and lysine content across a vast winter wheat genebank collection. Front. Plant Sci. 14 (2024) 1270298. https://dx.doi.org/10.3389/fpls.2023.1270298

Kotni P, van Hintum T, Maggioni L, Oppermann M, Weise S:

EURISCO update 2023: the European Search Catalogue for Plant Genetic Resources, a pillar for documentation of genebank material. Nucleic Acids Res. 51 (2023) D1465-D1469. https://dx.doi.org/10.1093/nar/gkac852

Rehman Arif M A, Tripodi P, Waheed M Q, Afzal I, Pistrick S, Schütze G, Börner A:

Genetic analyses of seed longevity in Capsicum annuum L. in cold storage conditions. Plants 12 (2023) 1321. https://dx.doi.org/10.3390/plants12061321

Shaw P D, Weise S, Obreza M, Raubach S, McCouch S, Kilian B, Werner P:

Database solutions for genebanks and germplasm collections. In: Ghamkhar K, Williams W, Brown A H D (Eds.): Plant Genetic Resources for the 21st Century. The OMICS Era. New York: Apple Academic Press (2023) ISBN 9781774910825, 285-309. https://dx.doi.org/10.1201/9781003302957

Weise S (Ed.):

Report of the EURISCO Training Workshop 2023. National Focal Points Regional Training Workshop, 12–14 September 2023, Plovdiv, Bulgaria European Cooperative Programme for Plant Genetic Resources, Rome, Italy (2023) 14 pp.

Weise S, Hoekstra R, Kutschan K J, Oppermann M, van Treuren R, Lohwasser U:

Analysis of gaps in rapeseed (Brassica napus L.) collections in European genebanks. Front. Plant Sci. 14 (2023) 1244467. https://dx.doi.org/10.3389/fpls.2023.1244467

Arend D, Beier S, König P, Lange M, Memon J A, Oppermann M, Scholz U, Weise S:

From genotypes to phenotypes – a plant perspective on current developments in data management and data publication. In: Chen M, Hofestädt R (Eds.): Integrative Bioinformatics – History and Future. Singapore: Springer Singapore (2022) ISBN 978-981-16-6795-4, 11-43. https://dx.doi.org/10.1007/978-981-16-6795-4_2

Badaeva E D, Konovalov F A, Knüpffer H, Fricano A, Ruban A S, Kehel Z, Zoshchuk S A, Surzhikov S A, Neumann K, Graner A, Hammer K, Filatenko A, Bogaard A, Jones G, Özkan H, Kilian B:

Genetic diversity, distribution and domestication history of the neglected GGAtAt genepool of wheat. Theor. Appl. Genet. 135 (2022) 755–776. https://dx.doi.org/10.1007/s00122-021-03912-0

Beier S, Fiebig A, Pommier C, Liyanage I, Lange M, Kersey P J, Weise S, Finkers R, Koylass B, Cezard T, Courtot M, Contreras-Moreira B, Naamati G, Dyer S, Scholz U:

Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR [version 2; peer review: 2 approved]. F1000Research 11 (2022) 231. https://dx.doi.org/10.12688/f1000research.109080.2

Berkner M O, Schulthess A W, Zhao Y, Jiang Y, Oppermann M, Reif J C:

Choosing the right tool: Leveraging of plant genetic resources in wheat (Triticum aestivum L.) benefits from selection of a suitable genomic prediction model. Theor. Appl. Genet. 135 (2022) 4391-4407. https://dx.doi.org/10.1007/s00122-022-04227-4

Schulthess A W, Kale S M, Liu F, Zhao Y, Philipp N, Rembe M, Jiang Y, Beukert U, Serfling A, Himmelbach A, Fuchs J, Oppermann M, Weise S, Boeven P H G, Schacht J, Longin C F H, Kollers S, Pfeiffer N, Korzun V, Lange M, Scholz U, Stein N, Mascher M, Reif J C:

Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvement. Nat. Genet. 54 (2022) 1544-1552. https://dx.doi.org/10.1038/s41588-022-01189-7

Schulthess A W, Kale S M, Zhao Y, Gogna A, Rembe M, Philipp N, Liu F, Beukert U, Serfling A, Himmelbach A, Oppermann M, Weise S, Boeven P H G, Schacht J, Longin C F H, Kollers S, Pfeiffer N, Korzun V, Fiebig A, Schüler D, Lange M, Scholz U, Stein N, Mascher M, Reif J C:

Large-scale genotyping and phenotyping of a worldwide winter wheat genebank for its use in pre-breeding. Sci. Data 9 (2022) 784. https://dx.doi.org/10.1038/s41597-022-01891-5

Adam-Blondon A-F, Boichard M, Bozzano M, Goritschnig S, Sharrock S, Sturaro E, van Hintum T, Weise S, Westergren M:

Strategy and priorities for delivering information services to end users. GenRes Bridge – Joining forces for genetic resources and biodiversity management, H2020 project no. 817580 European Commission. (2021) 32 pp.

Bellucci E, Aguilar O M, Alseekh S, Bett K, Brezeanu C, Cook D, De la Rosa L, Delledonne M, Dostatny D F, Ferreira J J, Geffroy V, Ghitarrini S, Kroc M, Kumar Agrawal S, Logozzo G, Marino M, Mary-Huard T, McClean P, Meglič V, Messer T, Muel F, Nanni L, Neumann K, Servalli F, Străjeru S, Varshney R K, Vasconcelos M W, Zaccardelli M, Zavarzin A, Bitocchi E, Frontoni E, Fernie A R, Gioia T, Graner A, Guasch L, Prochnow L, Opperman M, Susek K, Tenaillon M, Papa R:

The INCREASE project: Intelligent collections of food-legume genetic resources for European agrofood systems. Plant J. 108 (2021) 646-660. https://dx.doi.org/10.1111/tpj.15472

Cortinovis G, Oppermann M, Neumann K, Graner A, Gioia T, Marsella M, Alseekh S, Fernie A R, Papa R, Bellucci E, Bitocchi E:

Towards the development, maintenance, and standardized phenotypic characterization of single-seed-descent genetic resources for common bean. Curr. Protoc. 1 (2021) e133. https://dx.doi.org/10.1002/cpz1.133

Jiang Y, Weise S, Graner A, Reif J C:

Using genome-wide predictions to assess the phenotypic variation of a barley (Hordeum sp.) gene bank collection for important agronomic traits and passport information. Front. Plant Sci. 11 (2021) 604781. https://dx.doi.org/10.3389/fpls.2020.604781

Kroc M, Tomaszewska M, Czepiel K, Bitocchi E, Oppermann M, Neumann K, Guasch L, Bellucci E, Alseekh S, Graner A, Fernie A R, Papa R, Susek K:

Towards development, maintenance, and standardized phenotypic characterization of single-seed-descent genetic resources for lupins. Curr. Protoc. 1 (2021) e191. https://dx.doi.org/10.1002/cpz1.191

Sharma S, Schulthess A W, Bassi F M, Badaeva E D, Neumann K, Graner A, Özkan H, Werner P, Knüpffer H, Kilian B:

Introducing beneficial alleles from plant genetic resources into the wheat germplasm. Biology 10 (2021) 982. https://dx.doi.org/10.3390/biology10100982

Weise S:

Data management for preserving genetic diversity: Experiences and challenges. In: Hartmann S, Bachmann-Pfabe S, Byrne S, Feuerstein U, Julier B, Kölliker R, Kopecky D, Roldan-Ruiz I, Ruttink T, Sampoux J-P, Studer B, Vleugels T (Eds.): Exploiting genetic diversity of forages to fulfil their economic and environmental roles: Proceedings of the 34th Meeting of the EUCARPIA Fodder Crops and Amenity Grasses Section in cooperation with the EUCARPIA Festulolium Working Group, Freising, Germany, 06.-08. September 2021. Olomouc: Palacký University Press (2021) 12-16. https://dx.doi.org/10.5507/vup.21.24459677.03

Weise S, Kotni P:

Report of the EURISCO Training Workshop 2021. National Focal Points Regional Training Workshop, 10–12 November 2021, online meeting. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/resources/ecpgr-publications/publication/report-of-the-eurisco-training-workshop-2021-2021. (2021) 13.

Esquivel Pérez M Á, Castellanos Suarez J A, Hammer K, Knüpffer H:

Dime lo que siembras… ¡y te diré quién eres! [Sag mir, was du säst ... und ich sage dir, wer du bist!]. In: Pérez Soto F, Figueroa Hernández E, Godínez Montoya L, Salazar Moreno R (Eds.): Economía y crecimiento económico [Wirtschaft und Wirtschaftswachstum]. México: Asociación Mexicana de Investigación Interdisciplinaria A.C. (ASMIIA, A.C.) (2020) ISBN 978-607-99027-4-2, 165-182.

Herkner J R:

Auswahl und Anwendung geeigneter Metriken zur Messung der Qualität von Passportdaten im MCPD-Format zu pflanzengenetischen Ressourcen in Genbanken am Beispiel des European Search Catalogue for Plant Genetic Resources (EURISCO). (Bachelor Thesis) Merseburg, Hochschule Merseburg (FH), Fachbereich Ingenieur- und Naturwissenschaften (2020) 94 pp.

Lohwasser U, Weise S:

Genetic resources of medicinal and aromatic plants. In: Novak J, Blüthner W-D (Eds.): Medicinal, aromatic and stimulant plants. (Series: Handbook of plant breeding, Vol. 12) Cham: Springer (2020) ISBN 978-3-030-38791-4, 1-205. https://doi.org/10.1007/978-3-030-38792-1_1

Papoutsoglou E A, Faria D, Arend D, Arnaud E, Athanasiadis I N, Chaves I, Coppens F, Cornut G, Costa B V, Ćwiek-Kupczyńska H, Droesbeke B, Finkers R, Gruden K, Junker A, King G J, Krajewski P, Lange M, Laporte M-A, Michotey C, Oppermann M, Ostler R, Poorter H, Ramı́rez-Gonzalez R, Ramšak Ž, Reif J C, Rocca-Serra P, Sansone S-A, Scholz U, Tardieu F, Uauy C, Usadel B, Visser R G F, Weise S, Kersey P J, Miguel C M, Adam-Blondon A-F, Pommier C:

Enabling reusability of plant phenomic datasets with MIAPPE 1.1. New Phytol. 227 (2020) 260-273. https://dx.doi.org/10.1111/nph.16544

Weise S, Kreide S, Maxted N:

Concept for a possible extension of EURISCO for in situ crop wild relative and on-farm landrace data. Farmer’s Pride – Networking, partnerships and tools to enhance in situ conservation of European plant genetic resources, H2020 project no. 774271 European Commission. (2020) 23 pp.

Weise S, Lohwasser U, Oppermann M:

Document or lose it – on the importance of information management for genetic resources conservation in genebanks. Plants 9 (2020) 1050. https://doi.org/10.3390/plants9081050

Kreide S, Oppermann M, Weise S:

Advancement of taxonomic searches in the European search catalogue for plant genetic resources. Plant Genet. Resour. 17 (2019) 559-561. https://dx.doi.org/10.1017/S1479262119000339

Milner S G, Jost M, Taketa S, Mazón E R, Himmelbach A, Oppermann M, Weise S, Knüpffer H, Basterrechea M, König P, Schüler D, Sharma R, Pasam R K, Rutten T, Guo G, Xu D, Zhang J, Herren G, Müller T, Krattinger S G, Keller B, Jiang Y, González M Y, Zhao Y, Habekuß A, Färber S, Ordon F, Lange M, Börner A, Graner A, Reif J C, Scholz U, Mascher M, Stein N:

Genebank genomics highlights the diversity of a global barley collection. Nat. Genet. 51 (2019) 319-326. https://doi.org/10.1038/s41588-018-0266-x

Oppermann M, Weise S:

Assessment of the quality of accession describing metadata on plant genetic resources. Biodiversity Information Science and Standards 3 (2019) e34973. https://dx.doi.org/10.3897/biss.3.34973

Philipp N, Weise S, Oppermann M, Börner A, Keilwagen J, Kilian B, Arend D, Zhao Y, Graner A, Reif J C, Schulthess A W:

Historical phenotypic data from seven decades of seed regeneration in a wheat ex situ collection. Sci. Data 6 (2019) 137. https://dx.doi.org/10.1038/s41597-019-0146-y

Schulze Brüning R:

Comparison of statistical approaches to predict seed longevity. (Master Thesis) , Justus-Liebig-Universität Gießen und Technische Hochschule Mittelhessen, Department MNI, Life Science Informatics (2019) 54 pp.

Weise S, Kreide S, Oppermann M (compilers):

Report of the EURISCO Training Workshop 2018. National Focal Points Regional Training Workshop, 9–11 October 2018, Gatersleben, Germany. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/resources/ecpgr-publications/publication/report-of-the-eurisco-training-workshop-2018-national-focal-points-regional-training-workshop-9-11/. (2019) 13.

Bachmann-Pfabe S, Willner E, Oppermann M, Weise S, Dehmer K J:

Enhancing the sustainable use of Lolium perenne genetic resources from genebanks in plant breeding and research. In: Brazauskas G, Statkevičiūtė G, Jonavičienė K (Eds.): Breeding Grasses and Protein Crops in the Era of Genomics. Cham: Springer (2018) 978-3-319-89578-9, 27-32. https://dx.doi.org/10.1007/978-3-319-89578-9_5

González M Y, Philipp N, Schulthess A W, Weise S, Zhao Y, Börner A, Oppermann M, Graner A, Reif J C:

Unlocking historical phenotypic data from an ex situ collection to enhance the informed utilization of genetic resources of barley (Hordeum sp.). Theor. Appl. Genet. 131 (2018) 2009-2019. https://dx.doi.org/10.1007/s00122-018-3129-z

González M Y, Weise S, Zhao Y, Philipp N, Arend D, Börner A, Oppermann M, Graner A, Reif J C, Schulthess A W:

Unbalanced historical phenotypic data from seed regeneration of a barley ex situ collection. Sci. Data 5 (2018) 180278. https://dx.doi.org/10.1038/sdata.2018.278

Julier B, Skøt L, Weise S, Karagić Ð, Roldán-Ruiz I, Barre P, Lloyd D:

Breeding forage and grain legumes to increase EU’s and China’s protein self-sufficiency. In: Brazauskas G, Statkevičiūtė G, Jonavičienė K (Eds.): Breeding Grasses and Protein Crops in the Era of Genomics. Cham: Springer (2018) 978-3-319-89578-9, 103-108. https://dx.doi.org/10.1007/978-3-319-89578-9_18

Palmé A, Weise S, Willner E, Marum P, Sampoux J-P (compilers):

Forages WG report for phase IX (2014–2018). 15th Steering Committee meeting, 15–17 May 2018, Thessaloniki, Greece. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/fileadmin/templates/ecpgr.org/upload/SC_2018_Thessaloniki/WG_Chairs_reports/Forages_WG_Chair_s_report_for_SC_-_for_web.pdf. (2018) 7 pp.

Palmé A, Willner E, Marum P, Weise S (compilers):

AEGIS progress and improved access to data on European Forage PGR (ForageDataAccess). Activity Report of the ECPGR Activity Grant Scheme – Second Call, 2015. European Cooperative Programme for Plant Genetic Resources (2018) 17 pp. https://www.ecpgr.cgiar.org/fileadmin/bioversity/publications/pdfs/ActivtyReport_ECPGRForagesDataAccess_final_web_28_06_2018.pdf

Philipp N, Weise S, Oppermann M, Börner A, Graner A, Keilwagen J, Kilian B, Zhao Y S, Reif J C, Schulthess A W:

Leveraging the use of historical data gathered during seed regeneration of an ex situ genebank collection of wheat. Front. Plant Sci. 9 (2018) 609. https://dx.doi.org/10.3389/Fpls.2018.00609

Weise S:

EURISCO progress report (April 2014 – April 2018). ECPGR Phase IX, 15th Steering Committee meeting, 15–17 May 2018, Thessaloniki, Greece. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/fileadmin/templates/ecpgr.org/upload/SC_2018_Thessaloniki/Progress_report_EURISCO_2014-2018.pdf. (2018) 15.

Weise S, Oppermann M:

Best practices for setting up a repository of phenotypic data for European germplasm holdings. Biodiversity Information Science and Standards 2 (2018) e25223. https://dx.doi.org/10.3897/biss.2.25223

Zencirci N, Yılmaz H, Garaybayova N, Karagöz A, Kilian B, Özkan H, Hammer K, Knüpffer H:

Mirza (Hacızade) Gökgöl (1897–1981): the great explorer of wheat genetic resources in Turkey. Genet. Resour. Crop Evol. 65 (2018) 693-711. https://dx.doi.org/10.1007/s10722-018-0606-9

Badaeva E D, Knüpffer H, Mitrofanova O P, Kilian B:

Karyotype diversity of emmer wheat helps reconstructing possible migration routes of the crop. In: Proc. 13th International Wheat Genetics Symposium, April 23-28, 2017, Tulln, Austria. (2017) 129-131.

Bolger M, Schwacke R, Gundlach H, Schmutzer T, Chen J, Arend D, Oppermann M, Weise S, Lange M, Fiorani F, Spannagl M, Scholz U, Mayer K, Usadel B:

From plant genomes to phenotypes. J. Biotechnol. 261 (2017) 46-52. https://dx.doi.org/10.1016/j.jbiotec.2017.06.003

Maeße M:

Entwicklung eines Prototyps zur Erfassung und Verarbeitung von inhomogenen phänotypischen Daten. (Bachelor Thesis) Wernigerode, Hochschule Harz (2017) 79 pp.

Schmutzer T, Bolger M E, Rudd S, Chen J, Gundlach H, Arend D, Oppermann M, Weise S, Lange M, Spannagl M, Usadel B, Mayer K F X, Scholz U:

Bioinformatics in the plant genomic and phenomic domain: The German contribution to resources, services and perspectives. J. Biotechnol. 261 (2017) 37-45. https://dx.doi.org/10.1016/j.jbiotec.2017.07.006

Velcheva N, Knüpffer H, Weise S:

Bulgarian national inventory in international plant genetic resources databases. In: Cholakov T, Uzundzhalieva K (Eds.): Proceedings, International Conference “135 Years Agricultural Science in Sadovo and 40 Years Institute of Plant Genetic Resources – Sadovo”, Plovdiv, Bulgaria, 29–30 May 2017. (2017) ISBN 978-619-90842-0-5, 137-144.

Weise S:

EURISCO Newsletter. Dezember 2017. IPK Gatersleben, Germany. (2017) 3 pp. https://eurisco.ipk-gatersleben.de/apex/EURISCO_WEB.download_file?p_id=177.

Weise S:

EURISCO Newsletter. August 2017. IPK Gatersleben, Germany. (2017) 2 pp. https://eurisco.ipk-gatersleben.de/apex/EURISCO_WEB.download_file?p_id=165.

Weise S, Knüpffer H, Maggioni L, Adam-Blondon A F (compilers):

Report of the EURISCO Training Workshop 2016, National Focal Points Regional Training Workshop for Western Europe, 12–14 October 2016, Angers, France. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/working-groups/documentation-information/eurisco-training-workshop-2016/. (2017) 13.

Weise S, Oppermann M, Maggioni L, van Hintum T, Knüpffer H:

EURISCO: The European search catalogue for plant genetic resources. Nucleic Acids Res. 45 (2017) D1003-D1008. https://dx.doi.org/10.1093/nar/gkw755

Weise S, Oppermann M (compilers):

Report of the EURISCO Training Workshop 2017, National Focal Points Regional Training Workshop for Central Europe, 12–14 September 2017, Gatersleben, Germany. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/working-groups/documentation-information/eurisco-national-focal-points-training-workshop-2017/. (2017) 13.

Badaeva E D, Ruban A S, Zoshchuk S A, Surzhikov S A, Knüpffer H, Kilian B:

Molecular cytogenetic characterization of Triticum timopheevii chromosomes provides new insight on genome evolution of T. zhukovskyi. Plant Syst. Evol. 302 (2016) 943-956. https://dx.doi.org/10.1007/s00606-016-1309-3

Ćwiek-Kupczyńska H, Altmann T, Arend D, Arnaud E, Chen D, Cornut G, Fiorani F, Frohmberg W, Junker A, Klukas C, Lange M, Mazurek C, Nafissi A, Neveu P, van Oeveren J, Pommier C, Poorter H, Rocca-Serra P, Sansone S-A, Scholz U, van Schriek M, Seren Ü, Usadel B, Weise S, Kersey P, Krajewski P:

Measures for interoperability of phenotypic data: minimum information requirements and formatting. Plant Methods 12 (2016) 44. https://dx.doi.org/10.1186/s13007-016-0144-4

Jalli M, Benková M, Weise S, Leistrumaité A, Placinta D, Legzdina L, Zaczyński M, Švec M, Didier A, Neykov N, Knüpffer H, Jahoor A, Svensson J:

Identification and updating of C&E data in EBDB of AEGIS Hordeum (HordEva). Activity Report. ECPGR Activity Grant Scheme – First Call, 2014. European Cooperative Programme for Plant Genetic Resources (ECPGR) (2016) 20 pp. https://www.ecpgr.cgiar.org/fileadmin/bioversity/publications/pdfs/Hordeva_final_report.pdf

Knüpffer H:

Plant genetic resources from the Balkan Peninsula in the world’s genebanks. J. Agric. Food Environ. Sci. 69 (2016) 53-68.

Shaaf S, Sharma R, Baloch F S, Badaeva E D, Knüpffer H, Kilian B, Özkan H:

The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Mol. Genet. Genomics 291 (2016) 1259-1275. https://dx.doi.org/10.1007/s00438-016-1180-5

Weise S:

EURISCO Newsletter. Dezember 2016. IPK Gatersleben, Germany. (2016) 2 pp. https://eurisco.ipk-gatersleben.de/apex/EURISCO_WEB.download_file?p_id=142

Weise S:

EURISCO Newsletter. August 2016. IPK Gatersleben, Germany. (2016) 2 pp. https://eurisco.ipk-gatersleben.de/apex/EURISCO_WEB.download_file?p_id=121

Badaeva E D, Keilwagen J, Knüpffer H, Waßermann L, Dedkova O S, Mitrofanova O P, Kovaleva O N, Liapunova O A, Pukhalskiy V A, Özkan H, Graner A, Willcox G, Kilian B:

Chromosomal passports provide new insights into diffusion of emmer wheat. PLoS One 10 (2015) e0128556. https://dx.doi.org/10.1371/journal.pone.0128556

Hammer K, Knüpffer H:

Genetic resources of Triticum. In: Ogihara Y, Takumi S, Handa H (Eds.): Advances in wheat genetics: from genome to field: proceedings of the 12th International Wheat Genetics Symposium (Yokohama-shi, Japan). Tokyo: Springer (2015) ISBN 978-4-431-55674-9, 23-32. https://dx.doi.org/10.1007/978-4-431-55675-6_3

Knüpffer H, Zencirci N, Yılmaz H, Garaybayova N, Karagöz A, Kilian B, Özkan H, Hammer K:

Mirza Gökgöl – A pioneer of wheat genetic resources from Turkey. AMEA Genetik Ehtiyatlar İnstitutunun Elmi Əsərləri (Azerbaijan National Academy of Sciences Genetic Resources Institute Scientific Works) 5 (2015) 227-231.

Krajewski P, Chen D, Ćwiek H, van Dijk A D J, Fiorani F, Kersey P, Klukas C, Lange M, Markiewicz A, Nap J P, van Oeveren J, Pommier C, Scholz U, van Schriek M, Usadel B, Weise S:

Towards recommendations for metadata and data handling in plant phenotyping. J. Exp. Bot. 66 (2015) 5417-5427. https://dx.doi.org/10.1093/jxb/erv271

Kywan K:

Analyzing gene centres with the help of the checklist method – the case of Syria. (PhD Thesis) Witzenhausen, Universität Kassel, Fachbereich 11 Ökologische Agrarwissenschaften, Institut für Nutzpflanzenkunde (2015) 146 (+ IX Anhang) pp.

Oppermann M, Weise S, Dittmann C, Knüpffer H:

GBIS: the information system of the German Genebank. Database 2015 (2015) bav021. https://dx.doi.org/10.1093/database/bav021

Schmutzer T, Samans B, Dyrszka E, Ulpinnis C, Weise S, Stengel D, Colmsee C, Lespinasse D, Micic Z, Abel S, Duchscherer P, Breuer F, Abbadi A, Leckband G, Snowdon R, Scholz U:

Species-wide genome sequence and nucleotide polymorphisms from the model allopolyploid plant Brassica napus. Sci. Data 2 (2015) 150072. https://dx.doi.org/10.1038/sdata.2015.72

Schreiber F, Bader G D, Golebiewski M, Hucka M, Kormeier B, Le Novère N, Myers C, Nickerson D, Sommer B, Waltemath D, Weise S:

Specifications of standards in systems and synthetic biology. J. Integr. Bioinform. 12 (2015) 258. https://dx.doi.org/10.2390/biecoll-jib-2015-258

Weise S:

EURISCO Newsletter. December 2015. IPK Gatersleben, Germany. (2015) 2 pp. https://eurisco.ipk-gatersleben.de/apex/EURISCO_WEB.download_file?p_id=98

Weise S, Ibraliu A, Knüpffer H (compilers) (Eds.):

Report of the EURISCO Training Workshop 2015. National Focal Points Regional Training Workshop for Southeast Europe, 19–21 May 2015, Tirana, Albania. European Cooperative Programme for Plant Genetic Resources, Rome, Italy www.ecpgr.cgiar.org/working-groups/documentation-information/eurisco-training-workshop-2015/. (2015) 27 pp.

Arend D, Colmsee C, Knüpffer H, Oppermann M, Scholz U, Schüler D, Weise S, Lange M:

Data management experiences and best practices from the perspective of a plant research institute. In: Galhardas H, Rahm E (Eds.): Data integration in the life sciences: 10th international conference, DILS 2014, Lisbon, Portugal, July 17-18, 2014; proceedings (Series: Lecture Notes in Computer Science, Vol. 8574) Berlin [u.a.]: Springer (2014) ISBN 978-3-319-08589-0, 41-49. https://dx.doi.org/10.1007/978-3-319-08590-6_4

Esch M, Chen J, Weise S, Hassani-Pak K, Scholz U, Lange M:

A query suggestion workflow for life science IR-systems. J. Integr. Bioinform. 11 (2014) 237. https://dx.doi.org/doi:10.2390/biecoll-jib-2014-237

Keilwagen J, Kilian B, Özkan H, Babben S, Perovic D, Mayer K F, Walther A, Poskar C H, Ordon F, Eversole K, Börner A, Ganal M, Knüpffer H, Graner A, Friedel S:

Separating the wheat from the chaff - a strategy to utilize plant genetic resources from ex situ genebanks. Sci. Rep. 4 (2014) 5231. https://dx.doi.org/10.1038/srep05231

Kilian B, Knüpffer H, Hammer K:

Elisabeth Schiemann (1881-1972): a pioneer of crop plant research, with special reference to cereal phylogeny. Genet. Resour. Crop Evol. 61 (2014) 89-106. https://dx.doi.org/10.1007/s10722-013-0017-x

Keller E R J, Oppermann M:

The ECPGR Allium Database. ealldb.ipk-gatersleben.de (2013).

Pistrick K, Knüpffer H:

DFG-Projekt zur Digitalisierung des IPK-Herbariums (DFG project on IPK Herbarium digitalization). IPK Journal 22 (2013) 12.

Rodriguez M, Rau D, Angioi S A, Bellucci E, Bitocchi E, Nanni L, Knüpffer H, Negri V, Papa R, Attene G:

European Phaseolus coccineus L. landraces: Population structure and adaptation, as revealed by cpSSRs and phenotypic analyses. PLoS One 8 (2013) e57337. https://dx.doi.org/10.1371/journal.pone.0057337

Thomas K, Thanopoulos R, Knüpffer H, Bebeli P J:

Plant genetic resources in a touristic island: the case of Lefkada (Ionian Islands, Greece). Genet. Resour. Crop Evol. 60 (2013) 2431-2455. https://dx.doi.org/10.1007/s10722-013-0011-3

Colmsee C, Keller E R J, Zanke C, Senula A, Funke T, Oppermann M, Weise S, Scholz U:

The Garlic and Shallot Core Collection image database of IPK presenting two vegetatively maintained crops in the Federal ex situ genebank for agricultural and horticultural crops at Gatersleben, Germany. Genet. Resour. Crop Evol. 59 (2012) 1407-1415. https://dx.doi.org/10.1007/s10722-011-9768-4

Endresen D T F, Knüpffer H:

The Darwin Core extension for genebanks opens up new opportunities for sharing germplasm data sets. Biodivers. Informatics 8 (2012) 12-29.

Hanelt P, Knüpffer H, Hammer K:

Erna Bennett (5 August 1925- 3 January 2012). Genet. Resour. Crop Evol. 59 (2012) 967-970. https://dx.doi.org/10.1007/s10722-012-9872-0

Keller E R J, Oppermann M:

The ECPGR Allium Database. ealldb.ipk-gatersleben.de (2012).

Kilian B, Özkan H, Shaaf S, Hübner S, Pasam R K, Sharma R, Neumann K, Weißgerber W, Konovalov F A, Keilwagen J, Friedel S, Knüpffer H, von Korff M, Coupland G, Graner A:

Comparing genetic diversity within a crop and its wild progenitor: a case study for barley. In: Maxted N, Dulloo M E, Ford-Lloyd B V, Frese L, Iriondo J M, Pinheiro de Carvalho M A A (Eds.): Agrobiodiversity conservation: securing the diversity of crop wild relatives and landraces. Wallingford [u.a.]: CABI Publishing (2012) ISBN 978-1-84593-851-2, 186-192.

Thomas K, Thanopoulos R, Knüpffer H, Bebeli P J:

Plant genetic resources of Lemnos (Greece), an isolated island in the Northern Aegean Sea, with emphasis on landraces. Genet. Resour. Crop Evol. 59 (2012) 1417-1440. https://dx.doi.org/10.1007/s10722-011-9770-x

Vincent H, von Bothmer R, Knüpffer H, Amri A, Konopka J, Maxted N:

Genetic gap analysis of wild Hordeum taxa. Plant Genet. Resour. 10 (2012) 242-253. https://dx.doi.org/10.1017/S1479262112000317

Weise S, Harrer S, Grosse I, Knüpffer H, Willner E:

The European Poa Database (EPDB). poa.ipk-gatersleben.de (2012).

Endresen D T F, Knüpffer H:

The Darwin Core extension for genebanks opens up new opportunities for sharing genebank datasets. In: Endresen, D.T.F.: Utilization of plant genetic resources. A lifeboat to the gene pool. PhD thesis, Faculty of Life Sciences, Univ. Copenhagen (2011) 121-142.

Hovhannisyan N A, Dulloo M E, Yesayan A H, Knüpffer H, Amri A:

Tracking of powdery mildew and leaf rust resistance genes in Triticum boeoticum and T. urartu, wild relatives of common wheat. Czech. J. Genet. Plant Breed. 47 (2011) 45-57.

Knüpffer H, Maggioni L, Jalli M, Kolodinska A, Fasoula D, Lipman E:

Report of a working group on barley. Seventh meeting, 10-12 May 2011, Nicosia, Cyprus. Bioversity International, Rome, Italy. ii+43 pp. www.ecpgr.cgiar.org/fileadmin/www.ecpgr.cgiar.org/NW_and_WG_UPLOADS/Barley_7_Cyprus/Barley_7_Cyprus_revised210911.pdf (2011).

Maggioni L, Katsiotis A, Knüpffer H, Kleijer G, Lipman E:

Report of a Cereals Network. Second Meeting, 21-24 April 2008, Foça, Turkey. May 2011. Bioversity International, Rome, Italy (2011) iv+64 pp. www.ecpgr.cgiar.org/fileadmin/bioversity/publications/pdfs/1437_Report%20of%20a%20cereals%20network%20second%20meeting%2021-24%20April%202008%20Fo%C3%A7a%20Turkey.pdf (2011).

Weise S, Harrer S, Grosse I, Knüpffer H, Willner E:

The European Poa Database (EPDB). poa.ipk-gatersleben.de (2011).

Höppner F, Knüpffer H:

Status report on the German collections of flax and hemp. In: Report, ECP/GR Fibre Crops (Flax and Hemp) Working Group 1st meeting, Wageningen, The Netherlands, 14 – 16 June 2006. www.ecpgr.cgiar.org/Workgroups/Flax_Hemp/Flax%20Presentations%202006/Germany_Country_report_final.pdf (2010).

Knüpffer H:

The Balkan Collections 1941-1942 of Hans Stubbe in the Gatersleben Gene Bank. Czech. J. Genet. Plant Breed. 46 (2010) S27-S33.

Knüpffer H:

Plant genetic resources from Greece preserved in the German Genebank in Gatersleben, with emphasis on Hans Stubbe’s Balkan collections in 1941-1942. In: Πρακτικά 12ου Συνεδρίου της Ελληνικής Επιστημονικής Εταιρείας Γενετικής Βελτίωσης Φυτών, 2010. [Proceedings of the 12th Panehellenic Congress of the Hellenic Scientific Society of Plant Breeding & Genetics, 8-10 October 2008, Naoussa, Greece], CD-ROM. (2010) 16-29.

Oppermann M, Keilwagen J, Knüpffer H, Friedel S, Börner A:

Validation, analysis and aggregation of long-term trait observation data of genebank material. In: WEITZMANN, A.L. (ed.), Proceedings of TDWG (2010). Woods Hole, Massachusetts, USA (2010) 52-53. www.vliz.be/imisdocs/publications/215525.pdf (2010).

van Hintum T, Knüpffer H:

Current taxonomic composition of European genebank material documented in EURISCO. Plant Genet. Resour. 8 (2010) 182-188. https://dx.doi.org/10.1017/S1479262110000158

Weise S, Biermann N, Flemming S, Vorwald J, van Hintum T, Knüpffer H, Grosse I:

Proposal for improvement of PGR data exchange through XML. In: Proc. EPGRIS Final Conference, 11-13 September 2003, Prague, Czech Republic. International Plant Genetic Resources Institute (IPGRI). www.ecpgr.cgiar.org/Networks/Info_doc/FinalMeetingPresentations/Papers/Bierman_IPK_v0.14.doc (2010).

Weise S, Harrer S, Grosse I, Knüpffer H, Willner E:

The European Poa Database (EPDB). poa.ipk-gatersleben.de (2010).

Hovhannisyan N, Dulloo M E, Yesayan A, Röder M S, Knüpffer H, Amri A, Danielian A M:

Wild relatives of wheat as sources of useful genes. In Vitro Cell. Dev. Biol. - Animal 45 (2009) S82-S83.

Knüpffer H:

Triticeae genetic resources in ex situ genebank collections. In: Feuillet C, Muehlbauer G (Eds.): Genetics and genomics of the Triticeae, 1st ed. (Series: Plant genetics and genomics: crops and models, Vol. 7) New York, NY: Springer (2009) ISBN 978-0-387-77488-6, 31-79. https://dx.doi.org/10.1007/978-0-387-77489-3_2

Maggioni L, Katsiotis A, Knüpffer H, Kleijer G:

Report of a Cereals Network. Second Meeting, 21.-24.04.2008, Foça/Turkey. www.ecpgr.cgiar.org/Networks/Cereals/Cereals_Network_2ndMeeting_Draft_Feb09.pdf (2009).

Anonymous (including H. Knüpffer):

Cereals network meets in Turkey. Bioversity Newsl. Europe 36 (2008) 8.

Kell S P, Knüpffer H, Jury S L, Ford-Lloyd B V, Maxted N:

Crops and wild relatives of the Euro-Mediterranean region: making and using a conservation catalogue. In: Maxted N, Ford-Lloyd B, Kell S P, Iriondo J, Dulloo E, Turok J (Eds.): Crop wild relative conservation and use. Wallingford: CABI Publishing (2008) ISBN 978-1-8459-3099-8, 69-109.

Lange M, Rutkowski T, Stephanik A, Steuernagel B, Scholz U:

FLAREX – The IPK array experiment database. pgrc.ipk-gatersleben.de/flarex/ (2008).

Narang R:

Mansfeld’s world database of agricultural and horticultural crops. Transformation von Visual FoxPro nach Oracle, Migration in das „Berliner Modell“ und Neuentwicklung des Webinterface (2007-2008). mansfeld.ipk-gatersleben.de (2008).

Kell S P, Jury S L, Knüpffer H, Ford-Lloyd B V, Maxted N:

PGR Forum: serving the crop wild relative user community. Bocconea 21 (2007) 413-421.

Kleijer G, Häner R, Knüpffer H:

Triticale and Rye Genetic Resources in Europe: Ad hoc Meeting, 28 September 2006, Nyon, Switzerland. www.ecpgr.cgiar.org/Networks/Cereals/Triticale_Rye_Sept06.pdf (2007).

Knüpffer H:

Anbindung des Genbankinformationssystems (GBIS) als Data Provider für die Global Biodiversity Information Facility (GBIF), mit Hilfe der BioCASE-Provider-Software. www.gbif.org (2007).

Kuenne C, Grosse I, Matthies I, Scholz U, Sretenovic-Rajicic T, Stein N, Stephanik A, Steuernagel B, Weise S:

Using data warehouse technology in crop plant bioinformatics. J. Integr. Bioinform. 4 (2007) 88. https://dx.doi.org/10.2390/biecoll-jib-2007-88

Logozzo G, Donnoli R, Macaluso L, Papa R, Knüpffer H, Zeuli P S:

Analysis of the contribution of Mesoamerican and Andean gene pools to European common bean (Phaseolus vulgaris L.) germplasm and strategies to establish a core collection. Genet. Resour. Crop Evol. 54 (2007) 1763-1779. https://dx.doi.org/10.1007/s10722-006-9185-2

Weise S, Harrer S, Grosse I, Knüpffer H, Willner E:

The European Poa Database (EPDB). Plant Genet. Resour. Newsl. 150 (2007) 64-70.

Anonymus (incl H Knüpffer):

Barley: evaluation and conservation of barley genetic resources to improve their accessibility to breeders in Europe. In: Commission E (Ed.): Genetic resources in agriculture: a summery of the projects co-financed under Council regulation (EC) No 1467/94. Community programme 1994-99. : Office for Official Publications of the European Communities, Luxembourg/Luxembourg (2006) 28-31.

Anonymus (incl H Knüpffer):

New search portal for IPKs genebank goes on-line. IPGRI Newsl. for Europe 33 (2006) 17.

Börner A, Freytag U, Sperling U:

Analysis of wheat disease resistance data originating from screenings of Gatersleben genebank accessions during 1933 and 1992. (Erratum: Genet. Resour. Crop Evol. 53 (6) 2006, 1307). Genet. Resour. Crop Evol. 53 (2006) 453-465. https://dx.doi.org/10.1007/s10722-004-1158-8

Endresen D T F, Bäckerman J, Knüpffer H, Gaiji S:

Integrating standards. 3.1. Exchange of germplasm datasets with PyWrapper/BioCASE. In: Belbin L, Rissoné A, Weitzman A (Eds.): Proceedings of TDWG. Abstracts of the 2006 Annual Conference of Biodiversity Information Standards (TDWG), St. Louis, Missouri, U.S.A., 15-22 October 2006, . St. Louis: Missouri Botanical Garden (2006) ISBN 1-930723-56-3, 8.

Funke T, Weise S, Knüpffer H, Grosse I:

Ein neues Gesicht für die Europäische Gerstendatenbank (EBDB). Vortr. Pflanzenzücht. 70 (2006) 79-80.

Häner R, Kleijer G, Knüpffer H:

ECPGR ad hoc triticale and rye meeting. IPGRI Newsl. for Europe 33 (2006) 5.

Hartung K, Piepho H P, Knüpffer H:

Analysis of genebank evaluation data by using geostatistical methods. Genet. Resour. Crop Evol. 53 (2006) 737-751. https://dx.doi.org/10.1007/s10722-004-4716-1

Knüpffer H:

New search portal for IPKs genebank (Gatersleben, Germany) is online. (Plant Breed. News, 31. July 2006, edition 169). www.fao.org/WAICENT/FAOINFO/AGRICULT/AGP/AGPC/doc/services/pbn.html (2006).

Knüpffer H, Bulinska-Radomska Z, Bettencourt E:

Workshop on inventorying European cultivated plant species. IPGRI Newsl. for Europe 33 (2006) 14.

Knüpffer H, Döll S, Vorwald J:

50 Jahre Gaterslebener Sammelreisen - Vergleich des gesammelten Materials mit dem jetzigen Genbankbestand. Vortr. Pflanzenzücht. 70 (2006) 54-60.

Oppermann M, Knüpffer H:

GBIS- das neue Genbankinformationssystem am IPK. Vortr. Pflanzenzücht. 70 (2006) 47-49.

Oppermann M, Koller D, Winterberg T:

Praxiserfahrungen mit dem Oracle application development framework (ADF). Javaspektrum 1 (2006) 26-39.

Weise S, Knüpffer H, Vorwald J, Scholz U, Grosse I:

Integration von phänotypischen Daten in das Plant Data Warehouse. Vortr. Pflanzenzücht. 70 (2006) 84-86.